Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.41■□□□□ 0.54
SNRNP200O75643 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.41■□□□□ 0.54
SNRNP200O75643 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.41■□□□□ 0.54
SNRNP200O75643 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 MIR1238-201ENST00000408483 83 ntBASIC18.41■□□□□ 0.54
SNRNP200O75643 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.41■□□□□ 0.54
SNRNP200O75643 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.41■□□□□ 0.54
SNRNP200O75643 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.41■□□□□ 0.54
SNRNP200O75643 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
SNRNP200O75643 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.41■□□□□ 0.54
SNRNP200O75643 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.41■□□□□ 0.54
SNRNP200O75643 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.4■□□□□ 0.54
SNRNP200O75643 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.4■□□□□ 0.54
SNRNP200O75643 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.4■□□□□ 0.54
SNRNP200O75643 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 AC007663.1-201ENST00000438948 1240 ntBASIC18.4■□□□□ 0.54
SNRNP200O75643 AC116562.4-201ENST00000641316 2276 ntBASIC18.4■□□□□ 0.54
SNRNP200O75643 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.4■□□□□ 0.54
SNRNP200O75643 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.4■□□□□ 0.54
SNRNP200O75643 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SNRNP200O75643 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SNRNP200O75643 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.4■□□□□ 0.54
SNRNP200O75643 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SNRNP200O75643 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
SNRNP200O75643 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.4■□□□□ 0.54
SNRNP200O75643 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.4■□□□□ 0.54
SNRNP200O75643 AP000692.2-201ENST00000608391 879 ntBASIC18.4■□□□□ 0.54
SNRNP200O75643 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.4■□□□□ 0.54
SNRNP200O75643 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP200O75643 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNRNP200O75643 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.39■□□□□ 0.53
SNRNP200O75643 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP200O75643 AC211429.1-201ENST00000415277 523 ntBASIC18.39■□□□□ 0.53
SNRNP200O75643 AC008040.2-201ENST00000461049 708 ntBASIC18.39■□□□□ 0.53
SNRNP200O75643 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP200O75643 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP200O75643 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.39■□□□□ 0.53
SNRNP200O75643 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP200O75643 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SNRNP200O75643 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP200O75643 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP200O75643 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP200O75643 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP200O75643 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SNRNP200O75643 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 CRYGFP-201ENST00000418459 633 ntBASIC18.38■□□□□ 0.53
SNRNP200O75643 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.38■□□□□ 0.53
SNRNP200O75643 SLC25A1P4-201ENST00000567977 778 ntBASIC18.38■□□□□ 0.53
SNRNP200O75643 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.38■□□□□ 0.53
SNRNP200O75643 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.38■□□□□ 0.53
SNRNP200O75643 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 AC036111.1-201ENST00000533973 1582 ntBASIC18.38■□□□□ 0.53
SNRNP200O75643 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.38■□□□□ 0.53
SNRNP200O75643 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.38■□□□□ 0.53
SNRNP200O75643 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SNRNP200O75643 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.38■□□□□ 0.53
SNRNP200O75643 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.38■□□□□ 0.53
SNRNP200O75643 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.38■□□□□ 0.53
SNRNP200O75643 AC097493.4-201ENST00000641197 219 ntBASIC18.38■□□□□ 0.53
SNRNP200O75643 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SNRNP200O75643 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.38■□□□□ 0.53
SNRNP200O75643 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SNRNP200O75643 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SNRNP200O75643 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP200O75643 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNRNP200O75643 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRNP200O75643 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.37■□□□□ 0.53
SNRNP200O75643 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRNP200O75643 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.37■□□□□ 0.53
SNRNP200O75643 AC113347.1-201ENST00000413321 391 ntBASIC18.37■□□□□ 0.53
SNRNP200O75643 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 PRSS44-201ENST00000515154 1146 ntBASIC18.37■□□□□ 0.53
SNRNP200O75643 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNRNP200O75643 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP200O75643 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms