Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE3O75131 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.45■□□□□ 0.54
CPNE3O75131 AC092865.7-201ENST00000641832 219 ntBASIC18.45■□□□□ 0.54
CPNE3O75131 RCC2P6-201ENST00000526625 1557 ntBASIC18.45■□□□□ 0.54
CPNE3O75131 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CPNE3O75131 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE3O75131 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CPNE3O75131 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CPNE3O75131 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CPNE3O75131 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
CPNE3O75131 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.44■□□□□ 0.54
CPNE3O75131 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.44■□□□□ 0.54
CPNE3O75131 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.44■□□□□ 0.54
CPNE3O75131 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.44■□□□□ 0.54
CPNE3O75131 AC011298.2-201ENST00000617989 482 ntBASIC18.44■□□□□ 0.54
CPNE3O75131 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CPNE3O75131 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPNE3O75131 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CPNE3O75131 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CPNE3O75131 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CPNE3O75131 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE3O75131 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE3O75131 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE3O75131 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE3O75131 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE3O75131 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE3O75131 CRYGFP-201ENST00000418459 633 ntBASIC18.43■□□□□ 0.54
CPNE3O75131 AC004951.3-201ENST00000418645 1148 ntBASIC18.43■□□□□ 0.54
CPNE3O75131 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE3O75131 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE3O75131 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE3O75131 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE3O75131 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CPNE3O75131 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CPNE3O75131 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.43■□□□□ 0.54
CPNE3O75131 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE3O75131 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE3O75131 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE3O75131 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE3O75131 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE3O75131 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
CPNE3O75131 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE3O75131 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE3O75131 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE3O75131 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE3O75131 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE3O75131 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CPNE3O75131 AC005521.1-201ENST00000393351 872 ntBASIC18.42■□□□□ 0.54
CPNE3O75131 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE3O75131 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE3O75131 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CPNE3O75131 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.42■□□□□ 0.54
CPNE3O75131 AP000692.2-201ENST00000608391 879 ntBASIC18.42■□□□□ 0.54
CPNE3O75131 AC130371.2-201ENST00000619443 611 ntBASIC18.42■□□□□ 0.54
CPNE3O75131 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE3O75131 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE3O75131 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CPNE3O75131 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 AC026471.1-201ENST00000564629 3026 ntBASIC18.41■□□□□ 0.54
CPNE3O75131 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CPNE3O75131 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE3O75131 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CPNE3O75131 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CPNE3O75131 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CPNE3O75131 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CPNE3O75131 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE3O75131 AL137013.1-201ENST00000432946 1228 ntBASIC18.41■□□□□ 0.54
CPNE3O75131 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE3O75131 SLC25A3P1-201ENST00000443844 931 ntBASIC18.41■□□□□ 0.54
CPNE3O75131 SLC25A1P4-201ENST00000567977 778 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms