Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF11O60813 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF11O60813 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRAMEF11O60813 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF11O60813 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF11O60813 AC141586.3-201ENST00000562166 1838 ntBASIC19.53■□□□□ 0.72
PRAMEF11O60813 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF11O60813 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 KRT8P11-201ENST00000409686 1436 ntBASIC19.53■□□□□ 0.72
PRAMEF11O60813 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF11O60813 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF11O60813 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF11O60813 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF11O60813 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF11O60813 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PRAMEF11O60813 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF11O60813 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEF11O60813 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRAMEF11O60813 TSPY15P-201ENST00000457163 923 ntBASIC19.52■□□□□ 0.72
PRAMEF11O60813 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF11O60813 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEF11O60813 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF11O60813 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRAMEF11O60813 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.52■□□□□ 0.71
PRAMEF11O60813 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEF11O60813 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.52■□□□□ 0.71
PRAMEF11O60813 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.52■□□□□ 0.71
PRAMEF11O60813 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PRAMEF11O60813 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF11O60813 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PRAMEF11O60813 AC079598.2-202ENST00000546624 1451 ntBASIC19.5■□□□□ 0.71
PRAMEF11O60813 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.5■□□□□ 0.71
PRAMEF11O60813 UNC93B2-201ENST00000285383 730 ntBASIC19.5■□□□□ 0.71
PRAMEF11O60813 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.5■□□□□ 0.71
PRAMEF11O60813 PRSS44-201ENST00000515154 1146 ntBASIC19.5■□□□□ 0.71
PRAMEF11O60813 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PRAMEF11O60813 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.5■□□□□ 0.71
PRAMEF11O60813 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.5■□□□□ 0.71
PRAMEF11O60813 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PRAMEF11O60813 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEF11O60813 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.49■□□□□ 0.71
PRAMEF11O60813 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PRAMEF11O60813 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms