Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 AC007322.4-201ENST00000509611 723 ntBASIC14.36□□□□□ -0.11
SNAI2O43623 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.36□□□□□ -0.11
SNAI2O43623 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.36□□□□□ -0.11
SNAI2O43623 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.36□□□□□ -0.11
SNAI2O43623 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.36□□□□□ -0.11
SNAI2O43623 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.36□□□□□ -0.11
SNAI2O43623 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 CROCCP3-202ENST00000420820 1947 ntBASIC14.36□□□□□ -0.11
SNAI2O43623 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNAI2O43623 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SNAI2O43623 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.36□□□□□ -0.11
SNAI2O43623 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNAI2O43623 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.35□□□□□ -0.11
SNAI2O43623 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SNAI2O43623 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.35□□□□□ -0.11
SNAI2O43623 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SNAI2O43623 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNAI2O43623 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SNAI2O43623 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SNAI2O43623 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.34□□□□□ -0.11
SNAI2O43623 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNAI2O43623 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SNAI2O43623 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SNAI2O43623 MCRIP2P1-201ENST00000394346 511 ntBASIC14.34□□□□□ -0.11
SNAI2O43623 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.34□□□□□ -0.11
SNAI2O43623 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.34□□□□□ -0.11
SNAI2O43623 AC010536.3-201ENST00000620306 533 ntBASIC14.34□□□□□ -0.11
SNAI2O43623 AC105020.6-201ENST00000621523 1217 ntBASIC14.34□□□□□ -0.11
SNAI2O43623 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.34□□□□□ -0.11
SNAI2O43623 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SNAI2O43623 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SNAI2O43623 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNAI2O43623 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SNAI2O43623 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNAI2O43623 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNAI2O43623 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNAI2O43623 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNAI2O43623 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.33□□□□□ -0.11
SNAI2O43623 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNAI2O43623 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms