Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 KRT18P13-201ENST00000400056 1290 ntBASIC20.27■□□□□ 0.84
TRANK1O15050 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.27■□□□□ 0.84
TRANK1O15050 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.27■□□□□ 0.84
TRANK1O15050 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.27■□□□□ 0.84
TRANK1O15050 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRANK1O15050 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.27■□□□□ 0.84
TRANK1O15050 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.27■□□□□ 0.84
TRANK1O15050 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.27■□□□□ 0.84
TRANK1O15050 AL691432.2-201ENST00000607222 2038 ntBASIC20.27■□□□□ 0.84
TRANK1O15050 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRANK1O15050 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRANK1O15050 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRANK1O15050 TSPY22P-201ENST00000427496 604 ntBASIC20.26■□□□□ 0.83
TRANK1O15050 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TRANK1O15050 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRANK1O15050 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.26■□□□□ 0.83
TRANK1O15050 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.26■□□□□ 0.83
TRANK1O15050 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.26■□□□□ 0.83
TRANK1O15050 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRANK1O15050 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.26■□□□□ 0.83
TRANK1O15050 AC133561.1-201ENST00000568600 2415 ntBASIC20.26■□□□□ 0.83
TRANK1O15050 AL117328.2-201ENST00000624617 1940 ntBASIC20.26■□□□□ 0.83
TRANK1O15050 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.26■□□□□ 0.83
TRANK1O15050 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRANK1O15050 GPAT2P1-201ENST00000444924 1672 ntBASIC20.26■□□□□ 0.83
TRANK1O15050 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.26■□□□□ 0.83
TRANK1O15050 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.26■□□□□ 0.83
TRANK1O15050 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRANK1O15050 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRANK1O15050 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRANK1O15050 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
TRANK1O15050 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRANK1O15050 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.25■□□□□ 0.83
TRANK1O15050 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.25■□□□□ 0.83
TRANK1O15050 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.25■□□□□ 0.83
TRANK1O15050 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.25■□□□□ 0.83
TRANK1O15050 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRANK1O15050 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.25■□□□□ 0.83
TRANK1O15050 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRANK1O15050 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRANK1O15050 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRANK1O15050 HMGN1P19-201ENST00000436976 333 ntBASIC20.25■□□□□ 0.83
TRANK1O15050 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.25■□□□□ 0.83
TRANK1O15050 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRANK1O15050 SLC25A1P1-201ENST00000528351 927 ntBASIC20.25■□□□□ 0.83
TRANK1O15050 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRANK1O15050 REXO1L6P-202ENST00000619970 1078 ntBASIC20.25■□□□□ 0.83
TRANK1O15050 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.24■□□□□ 0.83
TRANK1O15050 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.24■□□□□ 0.83
TRANK1O15050 AC091304.2-201ENST00000564639 760 ntBASIC20.24■□□□□ 0.83
TRANK1O15050 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.24■□□□□ 0.83
TRANK1O15050 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.24■□□□□ 0.83
TRANK1O15050 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRANK1O15050 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRANK1O15050 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.24■□□□□ 0.83
TRANK1O15050 SAPCD2P3-201ENST00000455031 850 ntBASIC20.24■□□□□ 0.83
TRANK1O15050 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.24■□□□□ 0.83
TRANK1O15050 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.24■□□□□ 0.83
TRANK1O15050 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRANK1O15050 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
TRANK1O15050 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.24■□□□□ 0.83
TRANK1O15050 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRANK1O15050 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRANK1O15050 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRANK1O15050 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRANK1O15050 KRT8P26-201ENST00000534154 1276 ntBASIC20.23■□□□□ 0.83
TRANK1O15050 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.23■□□□□ 0.83
TRANK1O15050 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TRANK1O15050 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRANK1O15050 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRANK1O15050 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRANK1O15050 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.23■□□□□ 0.83
TRANK1O15050 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.23■□□□□ 0.83
TRANK1O15050 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.23■□□□□ 0.83
TRANK1O15050 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.23■□□□□ 0.83
TRANK1O15050 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.23■□□□□ 0.83
TRANK1O15050 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRANK1O15050 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRANK1O15050 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.23■□□□□ 0.83
TRANK1O15050 AL121912.1-201ENST00000603683 238 ntBASIC20.23■□□□□ 0.83
TRANK1O15050 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.23■□□□□ 0.83
TRANK1O15050 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.23■□□□□ 0.83
TRANK1O15050 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms