Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 IGHV3OR16-7-201ENST00000604106 360 ntBASIC31.24■■■□□ 2.59
CHD1O14646 LITAF-220ENST00000620789 692 ntTSL 5 BASIC31.24■■■□□ 2.59
CHD1O14646 AC055717.3-201ENST00000622967 595 ntBASIC31.24■■■□□ 2.59
CHD1O14646 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC31.24■■■□□ 2.59
CHD1O14646 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHD1O14646 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC31.24■■■□□ 2.59
CHD1O14646 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CHD1O14646 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
CHD1O14646 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CHD1O14646 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CHD1O14646 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHD1O14646 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHD1O14646 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC31.24■■■□□ 2.59
CHD1O14646 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC31.24■■■□□ 2.59
CHD1O14646 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC31.24■■■□□ 2.59
CHD1O14646 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHD1O14646 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHD1O14646 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CHD1O14646 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHD1O14646 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC31.23■■■□□ 2.59
CHD1O14646 PMS2P7-201ENST00000506558 1336 ntBASIC31.23■■■□□ 2.59
CHD1O14646 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHD1O14646 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHD1O14646 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC31.23■■■□□ 2.59
CHD1O14646 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHD1O14646 AL691403.2-201ENST00000618460 490 ntBASIC31.23■■■□□ 2.59
CHD1O14646 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC31.23■■■□□ 2.59
CHD1O14646 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
CHD1O14646 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD1O14646 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD1O14646 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC31.22■■■□□ 2.59
CHD1O14646 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHD1O14646 CDV3-207ENST00000508481 661 ntTSL 3 BASIC31.22■■■□□ 2.59
CHD1O14646 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
CHD1O14646 FICD-205ENST00000552758 603 ntTSL 2 BASIC31.22■■■□□ 2.59
CHD1O14646 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC31.22■■■□□ 2.59
CHD1O14646 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC31.22■■■□□ 2.59
CHD1O14646 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD1O14646 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC31.22■■■□□ 2.59
CHD1O14646 FP700111.2-201ENST00000619190 1892 ntBASIC31.22■■■□□ 2.59
CHD1O14646 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD1O14646 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
CHD1O14646 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 MIR3917-201ENST00000580971 93 ntBASIC31.21■■■□□ 2.59
CHD1O14646 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC31.21■■■□□ 2.59
CHD1O14646 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 Z83836.1-201ENST00000624605 1642 ntBASIC31.21■■■□□ 2.59
CHD1O14646 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC31.21■■■□□ 2.59
CHD1O14646 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD1O14646 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC31.21■■■□□ 2.59
CHD1O14646 AC027796.2-201ENST00000575326 344 ntBASIC31.21■■■□□ 2.59
CHD1O14646 Z69720.1-201ENST00000601483 472 ntBASIC31.21■■■□□ 2.59
CHD1O14646 AL390719.2-201ENST00000606993 987 ntBASIC31.21■■■□□ 2.59
CHD1O14646 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHD1O14646 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHD1O14646 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC31.2■■■□□ 2.59
CHD1O14646 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHD1O14646 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CHD1O14646 MED22-202ENST00000371999 987 ntTSL 3 BASIC31.2■■■□□ 2.58
CHD1O14646 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CHD1O14646 MOK-208ENST00000519058 917 ntTSL 2 BASIC31.2■■■□□ 2.58
CHD1O14646 PLK5-205ENST00000642079 1969 ntBASIC31.2■■■□□ 2.58
CHD1O14646 NSUN5P1-202ENST00000421140 1535 ntBASIC31.19■■■□□ 2.58
CHD1O14646 NSUN5P2-203ENST00000457352 1529 ntBASIC31.19■■■□□ 2.58
CHD1O14646 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC31.19■■■□□ 2.58
CHD1O14646 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC31.19■■■□□ 2.58
CHD1O14646 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHD1O14646 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC31.19■■■□□ 2.58
CHD1O14646 TEN1-204ENST00000588202 862 ntTSL 3 BASIC31.19■■■□□ 2.58
CHD1O14646 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC31.19■■■□□ 2.58
CHD1O14646 AC140113.2-201ENST00000604370 208 ntBASIC31.19■■■□□ 2.58
CHD1O14646 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHD1O14646 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHD1O14646 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC31.19■■■□□ 2.58
CHD1O14646 FABP5-202ENST00000396359 986 ntTSL 5 BASIC31.18■■■□□ 2.58
CHD1O14646 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CHD1O14646 CFL1-212ENST00000531413 636 ntTSL 3 BASIC31.18■■■□□ 2.58
CHD1O14646 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC31.18■■■□□ 2.58
CHD1O14646 AL592071.1-201ENST00000611956 408 ntBASIC31.18■■■□□ 2.58
CHD1O14646 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC31.18■■■□□ 2.58
CHD1O14646 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC31.18■■■□□ 2.58
CHD1O14646 AP005901.3-202ENST00000581653 237 ntBASIC31.18■■■□□ 2.58
CHD1O14646 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC31.18■■■□□ 2.58
CHD1O14646 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
CHD1O14646 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC31.18■■■□□ 2.58
CHD1O14646 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1O14646 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms