Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20■□□□□ 0.79
CCDC188H7C350 HES2-206ENST00000489730 730 ntTSL 2 BASIC20■□□□□ 0.79
CCDC188H7C350 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20■□□□□ 0.79
CCDC188H7C350 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20■□□□□ 0.79
CCDC188H7C350 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 NOC2LP1-202ENST00000452600 2235 ntBASIC20■□□□□ 0.79
CCDC188H7C350 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 KRT8P8-201ENST00000434750 1448 ntBASIC20■□□□□ 0.79
CCDC188H7C350 GOLGA6L3-201ENST00000507199 1679 ntBASIC20■□□□□ 0.79
CCDC188H7C350 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC188H7C350 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC188H7C350 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC188H7C350 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC188H7C350 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC188H7C350 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.99■□□□□ 0.79
CCDC188H7C350 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC188H7C350 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC188H7C350 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC188H7C350 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC188H7C350 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC188H7C350 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC188H7C350 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC188H7C350 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC188H7C350 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC188H7C350 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC188H7C350 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC188H7C350 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC188H7C350 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC188H7C350 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC188H7C350 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC188H7C350 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC188H7C350 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC188H7C350 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCDC188H7C350 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC188H7C350 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC188H7C350 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC188H7C350 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC188H7C350 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 KRT18P5-201ENST00000436075 1291 ntBASIC19.97■□□□□ 0.79
CCDC188H7C350 AC005829.2-201ENST00000571422 1056 ntBASIC19.97■□□□□ 0.79
CCDC188H7C350 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 MIR6821-201ENST00000617625 74 ntBASIC19.97■□□□□ 0.79
CCDC188H7C350 NOC2LP2-201ENST00000407594 1944 ntBASIC19.97■□□□□ 0.79
CCDC188H7C350 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC188H7C350 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC188H7C350 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC188H7C350 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC188H7C350 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC188H7C350 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC188H7C350 AC005332.8-201ENST00000622750 2735 ntBASIC19.96■□□□□ 0.79
CCDC188H7C350 ANO7L1-203ENST00000602586 1720 ntBASIC19.96■□□□□ 0.79
CCDC188H7C350 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC188H7C350 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CCDC188H7C350 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC188H7C350 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC188H7C350 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC188H7C350 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC188H7C350 YBX1P10-201ENST00000444752 975 ntBASIC19.96■□□□□ 0.79
CCDC188H7C350 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms