Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP99D6REC4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CFAP99D6REC4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP99D6REC4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CFAP99D6REC4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CFAP99D6REC4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CFAP99D6REC4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP99D6REC4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP99D6REC4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP99D6REC4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP99D6REC4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP99D6REC4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.18■□□□□ 0.66
CFAP99D6REC4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.18■□□□□ 0.66
CFAP99D6REC4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 NIFKP9-201ENST00000419265 221 ntBASIC19.17■□□□□ 0.66
CFAP99D6REC4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CFAP99D6REC4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CFAP99D6REC4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 HLA-A-209ENST00000638375 975 ntBASIC19.16■□□□□ 0.66
CFAP99D6REC4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP99D6REC4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.16■□□□□ 0.66
CFAP99D6REC4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 MIR718-201ENST00000390190 70 ntBASIC19.15■□□□□ 0.66
CFAP99D6REC4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 KSR1P1-201ENST00000446298 240 ntBASIC19.15■□□□□ 0.66
CFAP99D6REC4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 AF186192.3-201ENST00000583427 947 ntBASIC19.15■□□□□ 0.66
CFAP99D6REC4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 AC073195.1-201ENST00000607241 877 ntBASIC19.15■□□□□ 0.66
CFAP99D6REC4 AL445675.2-201ENST00000620291 557 ntBASIC19.15■□□□□ 0.66
CFAP99D6REC4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP99D6REC4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CFAP99D6REC4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CFAP99D6REC4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms