Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 AC079598.2-202ENST00000546624 1451 ntBASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 SOX15-203ENST00000570788 1093 ntBASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A16PA6NEW6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 TSPY21P-201ENST00000433481 731 ntBASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A16PA6NEW6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A16PA6NEW6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A16PA6NEW6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms