Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.22■□□□□ 0.67
CCDC189A1A4V9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 AC083906.2-201ENST00000511578 360 ntBASIC19.22■□□□□ 0.67
CCDC189A1A4V9 AC091874.3-201ENST00000512672 1195 ntBASIC19.22■□□□□ 0.67
CCDC189A1A4V9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC189A1A4V9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 DUSP5P2-201ENST00000426873 1033 ntBASIC19.21■□□□□ 0.67
CCDC189A1A4V9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC189A1A4V9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 MST1L-201ENST00000442552 2185 ntBASIC19.2■□□□□ 0.66
CCDC189A1A4V9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 AC006970.2-201ENST00000450065 779 ntBASIC19.2■□□□□ 0.66
CCDC189A1A4V9 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 MIR4758-201ENST00000577688 71 ntBASIC19.2■□□□□ 0.66
CCDC189A1A4V9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 HLA-B-256ENST00000639848 1089 ntBASIC19.2■□□□□ 0.66
CCDC189A1A4V9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC189A1A4V9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms