Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NTF6G-201ENST00000591094 616 ntBASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 AL133373.2-201ENST00000623187 2828 ntBASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 FEM1AP3-201ENST00000403722 1741 ntBASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 CYP2T1P-201ENST00000432607 1285 ntBASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV27A0A0K0K1C4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV27A0A0K0K1C4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.58□□□□□ -0.23
TRBV27A0A0K0K1C4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.58□□□□□ -0.23
TRBV27A0A0K0K1C4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TRBV27A0A0K0K1C4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.58□□□□□ -0.23
TRBV27A0A0K0K1C4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV27A0A0K0K1C4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV27A0A0K0K1C4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 PCDHB18P-201ENST00000524813 2368 ntBASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 AC010980.2-201ENST00000587099 1412 ntBASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 DUX4L16-201ENST00000555130 1264 ntBASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 OR10C1-204ENST00000622521 1039 ntBASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV27A0A0K0K1C4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms