Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 PCED1CP-201ENST00000419887 785 ntBASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 AC009947.2-201ENST00000444014 672 ntBASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 ZNF815P-204ENST00000434898 1737 ntBASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 AC104417.2-201ENST00000562989 1793 ntBASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV17A0A0B4J275 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 TSPY21P-201ENST00000433481 731 ntBASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 FAM86EP-206ENST00000510506 987 ntBASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 IER3-202ENST00000376377 1350 ntBASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 AC099778.1-201ENST00000568593 1911 ntBASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV17A0A0B4J275 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV17A0A0B4J275 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV17A0A0B4J275 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms