Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 MIR935-201ENST00000401179 91 ntBASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV30A0A087WSZ9 KRT8P8-201ENST00000434750 1448 ntBASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 AC020763.4-201ENST00000623414 4170 ntBASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV30A0A087WSZ9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 AC141586.3-201ENST00000562166 1838 ntBASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 PNMA6B-201ENST00000538162 1200 ntBASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 AL138781.1-201ENST00000566567 1274 ntBASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 AL121829.2-201ENST00000620908 328 ntBASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV30A0A087WSZ9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV30A0A087WSZ9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV30A0A087WSZ9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV30A0A087WSZ9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms