Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 RPL30P13-201ENST00000418873 348 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 RPS3P2-201ENST00000421346 701 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 SEPT7P4-201ENST00000437076 306 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AC010655.1-201ENST00000449336 292 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 PTMAP1-205ENST00000455552 325 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 RNU6-953P-201ENST00000459154 107 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AC010683.1-201ENST00000473673 378 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AP004242.1-201ENST00000533701 349 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 OR1F2P-201ENST00000570470 933 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 RPL23AP78-201ENST00000599928 470 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AC097381.3-201ENST00000608962 462 ntBASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX6Q9UPM6 AC090132.1-201ENST00000524071 1480 ntBASIC6.59□□□□□ -1.36
LHX6Q9UPM6 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
LHX6Q9UPM6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.59□□□□□ -1.36
LHX6Q9UPM6 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.59□□□□□ -1.36
LHX6Q9UPM6 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
LHX6Q9UPM6 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
LHX6Q9UPM6 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
LHX6Q9UPM6 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
LHX6Q9UPM6 THAP12P7-201ENST00000520248 2290 ntBASIC6.59□□□□□ -1.36
LHX6Q9UPM6 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 MIR323A-201ENST00000362199 86 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 MIR410-201ENST00000362222 80 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 RNU6-14P-201ENST00000384630 106 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 RNU6-21P-201ENST00000384710 107 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC008171.1-201ENST00000395058 200 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC099782.1-201ENST00000425889 474 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC011742.1-201ENST00000431448 434 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AL645939.3-201ENST00000435408 225 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC079354.2-201ENST00000453523 154 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 BX323845.2-201ENST00000458382 234 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 RPS26P11-201ENST00000463445 348 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 RPS26P6-201ENST00000475156 348 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 RN7SL667P-201ENST00000582817 298 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC004852.3-201ENST00000614131 326 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 CYP4F35P-202ENST00000636121 390 ntBASIC6.58□□□□□ -1.36
LHX6Q9UPM6 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
LHX6Q9UPM6 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 AP000432.2-201ENST00000624164 2048 ntBASIC6.57□□□□□ -1.36
LHX6Q9UPM6 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 AP002800.1-201ENST00000624982 2225 ntBASIC6.57□□□□□ -1.36
LHX6Q9UPM6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX6Q9UPM6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms