Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC093106.2-201ENST00000428212 385 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC094019.1-201ENST00000434678 472 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC234775.1-201ENST00000454247 670 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC099670.1-201ENST00000455141 783 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC112187.1-201ENST00000455837 479 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AL445687.2-201ENST00000458156 728 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RPS20P21-201ENST00000466859 343 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AL035690.1-201ENST00000490892 383 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC110794.1-201ENST00000505816 425 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RNA5SP206-201ENST00000516703 121 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC063949.1-201ENST00000552900 865 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC018462.2-201ENST00000605375 395 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 FAM157A-202ENST00000615155 405 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AL137067.2-201ENST00000621202 131 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AL122023.1-201ENST00000622847 530 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 CYP4F35P-202ENST00000636121 390 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC01613-201ENST00000561476 2780 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC010266.2-201ENST00000564741 3255 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-238P-201ENST00000363313 106 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 NDUFS5P1-201ENST00000405668 289 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU4-65P-201ENST00000410473 140 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC008267.5-201ENST00000424928 265 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC236972.1-201ENST00000433225 199 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AL645936.1-201ENST00000441979 518 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 FABP5P13-201ENST00000452144 328 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 snoU109.4-201ENST00000458953 143 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC004453.1-201ENST00000487895 408 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC116655.1-201ENST00000508324 901 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC026782.1-201ENST00000512952 449 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-1069P-201ENST00000516612 133 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-307P-201ENST00000516743 106 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 SNORD116.3-201ENST00000517176 78 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC103783.1-201ENST00000520506 373 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AP005902.1-201ENST00000521358 186 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC020916.2-201ENST00000591242 360 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AL591167.1-201ENST00000607321 456 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AL589994.2-201ENST00000621124 579 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 AC005592.1-201ENST00000566527 1640 ntBASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHGA11Q9Y5H2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 AL591135.1-201ENST00000401578 5914 ntBASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHGA11Q9Y5H2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms