Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ERG-210ENST00000442448 5034 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MAPK10-346ENST00000641737 2633 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PPIAP22-201ENST00000358455 498 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 Y_RNA.12-201ENST00000362393 112 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU4-15P-201ENST00000362613 141 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORD3G-201ENST00000362796 215 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORA68B-201ENST00000364518 133 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 Y_RNA.375-201ENST00000365625 101 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-1181P-201ENST00000384191 106 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORA42.2-201ENST00000384771 134 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IGLV5-45-201ENST00000390296 397 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC069281.1-201ENST00000392471 570 ntTSL 4 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL645927.1-201ENST00000396783 406 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL031121.1-201ENST00000406553 254 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL023807.1-201ENST00000407932 359 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU2-7P-201ENST00000410794 178 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-272P-201ENST00000411028 104 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNA5SP115-201ENST00000411160 107 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CRIP1P3-201ENST00000416794 220 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SEM1-204ENST00000417009 350 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 BX510359.2-201ENST00000417920 305 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AF274573.1-201ENST00000430535 494 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNRPGP13-201ENST00000442212 177 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 GPM6BP3-201ENST00000442797 145 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 Z93930.1-201ENST00000447099 245 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC073583.1-201ENST00000447553 400 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL935212.3-201ENST00000450729 284 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC000067.1-201ENST00000452326 287 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RPSAP54-201ENST00000454001 886 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNRPGP5-201ENST00000456003 220 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM236D-202ENST00000458170 451 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU1-131P-201ENST00000458943 161 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL724P-201ENST00000461895 271 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AP000873.1-201ENST00000463987 400 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RPL23AP14-201ENST00000468281 468 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL507P-201ENST00000474076 296 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC092865.4-201ENST00000477936 615 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC106707.2-201ENST00000484182 374 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SL700P-201ENST00000496982 294 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC146949.1-201ENST00000505946 423 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC146944.1-201ENST00000508439 418 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MICE-207ENST00000510438 1157 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORD116-26-201ENST00000516006 96 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU2-35P-201ENST00000516446 142 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SCARNA14-201ENST00000516903 136 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-352P-201ENST00000516908 107 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms