Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 U8.13-201ENST00000390842 128 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 BTF3P7-201ENST00000407097 488 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AP000936.3-201ENST00000438127 255 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 HMGB3P11-201ENST00000440127 604 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC010198.2-201ENST00000550612 259 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC009101.1-201ENST00000568135 242 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC004696.1-201ENST00000614345 607 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC022031.1-201ENST00000585985 2593 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 SETP15-201ENST00000412724 337 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 RPL23AP31-201ENST00000456160 467 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 Z98941.1-201ENST00000407764 100 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC103858.2-201ENST00000621471 543 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 RNU6-321P-201ENST00000410912 106 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC135721.1-201ENST00000497954 479 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 MTND5P6-201ENST00000422338 1798 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 RNU6-582P-201ENST00000362989 107 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AC068657.1-201ENST00000520807 306 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 RANP3-201ENST00000530970 276 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
CSMD1Q96PZ7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 HMGB1P25-201ENST00000468402 607 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 RN7SL622P-201ENST00000585292 275 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 AC107871.2-201ENST00000612894 502 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 RPL23AP4-201ENST00000427757 463 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 AC010928.3-201ENST00000587712 541 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 AL365503.1-201ENST00000605247 905 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 AC090897.3-201ENST00000636973 1157 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 SPATA2P1-201ENST00000431223 2055 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 AC012020.1-201ENST00000624541 1728 ntBASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.22□□□□□ -2.05
CSMD1Q96PZ7 RN7SKP44-201ENST00000363602 316 ntBASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 RNU6-253P-201ENST00000384730 105 ntBASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 MOB1AP2-201ENST00000446060 614 ntBASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 RN7SL75P-201ENST00000461926 281 ntBASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 RPL30P9-201ENST00000465586 330 ntBASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 OR4U1P-201ENST00000554958 912 ntBASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
CSMD1Q96PZ7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 AC091564.4-201ENST00000533934 2194 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 AC092593.1-201ENST00000515413 1815 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms