Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 MTCO1P14-201ENST00000441695 1559 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AL021368.2-201ENST00000606125 5352 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC8P31273 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HOXC8P31273 RNU6-224P-201ENST00000384055 107 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 Y_RNA.472-201ENST00000384322 102 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 RPL31P2-201ENST00000413849 377 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 RPL22P18-201ENST00000417197 377 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 KCTD9P3-201ENST00000434597 1169 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC8P31273 SNORA71B-202ENST00000439232 272 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 RPS3AP46-201ENST00000448352 682 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXC8P31273 NPM1P13-201ENST00000452663 865 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 NF1P3-201ENST00000457709 450 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 GAPDHP39-201ENST00000481866 979 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 HIGD1AP3-201ENST00000515857 278 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC8P31273 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC8P31273 AC090281.1-201ENST00000523019 276 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 MTATP6P15-201ENST00000527233 835 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 OR4C2P-201ENST00000530855 1064 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC8P31273 OR4G1P-201ENST00000588632 938 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC8P31273 AC025946.2-201ENST00000603398 234 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AP003973.1-201ENST00000604639 691 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AL583856.2-201ENST00000606298 543 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 U3.45-201ENST00000607547 219 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AC231759.1-201ENST00000616455 597 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC8P31273 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC8P31273 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC8P31273 PABPC1P7-201ENST00000413177 1513 ntBASIC4.16□□□□□ -1.74
HOXC8P31273 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC8P31273 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC8P31273 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HOXC8P31273 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC8P31273 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXC8P31273 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC8P31273 HMGB1P5-201ENST00000255320 642 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 RNU6-1226P-201ENST00000384317 107 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 MIR649-201ENST00000384843 97 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC8P31273 MTND4P13-201ENST00000402078 1023 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC245052.5-201ENST00000416320 649 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 RPS3AP37-201ENST00000419176 745 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC010099.3-201ENST00000423896 409 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 IFNNP1-201ENST00000429219 553 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC011742.1-201ENST00000431448 434 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 EXTL2P1-201ENST00000446218 416 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC004022.1-201ENST00000447766 1066 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC073387.1-201ENST00000453261 709 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 VN1R40P-201ENST00000455196 941 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC8P31273 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC8P31273 RANP9-201ENST00000519957 271 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 IGLVIV-53-201ENST00000520107 367 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC8P31273 MRPS36P5-201ENST00000551909 298 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC8P31273 AC093519.1-201ENST00000566109 298 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 AC097478.2-201ENST00000610572 514 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC096577.2-201ENST00000611455 153 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC8P31273 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC8P31273 C2orf27A-204ENST00000623058 969 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AC004943.3-201ENST00000624116 600 ntBASIC4.15□□□□□ -1.75
HOXC8P31273 AL512506.2-201ENST00000624472 458 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms