Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC006362.1-201ENST00000567392 174 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 AP001180.3-201ENST00000582221 145 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 BNIP3P22-201ENST00000593399 556 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 IPO5P1-202ENST00000600039 287 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 AC087752.4-201ENST00000605911 462 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.29□□□□□ -1.56
CNGA1P29973 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.29□□□□□ -1.56
CNGA1P29973 MIR6715B-201ENST00000637172 77 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNGA1P29973 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNGA1P29973 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.29□□□□□ -1.56
CNGA1P29973 AL136164.3-201ENST00000624429 3978 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CNGA1P29973 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.29□□□□□ -1.56
CNGA1P29973 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNGA1P29973 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.29□□□□□ -1.56
CNGA1P29973 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNGA1P29973 AC017104.4-201ENST00000636283 1592 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNGA1P29973 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNGA1P29973 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 OR11H5P-202ENST00000641612 1325 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNGA1P29973 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CNGA1P29973 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CNGA1P29973 FGF7P2-201ENST00000332473 296 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 RNU5F-7P-201ENST00000363696 115 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 RNVU1-3-201ENST00000364313 161 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 RNU6-769P-201ENST00000384407 104 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 MIR134-201ENST00000385258 73 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 U8.14-201ENST00000390843 143 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 U3.29-201ENST00000391296 212 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AL138880.1-201ENST00000405824 642 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC011933.1-201ENST00000413334 321 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.28□□□□□ -1.56
CNGA1P29973 RAD23BP1-201ENST00000421404 1227 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 MTCO2P34-201ENST00000421994 607 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AL356387.2-201ENST00000422272 243 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC007742.1-201ENST00000425789 329 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AL445669.1-201ENST00000426743 755 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC011998.1-201ENST00000433403 117 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.28□□□□□ -1.56
CNGA1P29973 RPL37P21-201ENST00000435890 276 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 ELOCP26-201ENST00000436067 329 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 AL592447.1-201ENST00000447592 540 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 RPL29P29-201ENST00000448725 423 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 OR6K1P-201ENST00000456766 971 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC116533.1-201ENST00000459748 321 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 HMGB1P36-201ENST00000487709 576 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC034159.1-201ENST00000513885 583 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 RN7SKP46-201ENST00000515942 234 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.28□□□□□ -1.56
CNGA1P29973 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.28□□□□□ -1.56
CNGA1P29973 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNGA1P29973 MIR4307-201ENST00000582802 84 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.28□□□□□ -1.56
CNGA1P29973 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 AL353997.4-201ENST00000586196 166 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC008759.1-201ENST00000589783 983 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 AC022146.1-201ENST00000595307 847 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC090181.2-201ENST00000602975 672 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 RNF138P2-201ENST00000603490 592 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 PRELID3BP8-201ENST00000604148 295 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 MIR92B-201ENST00000607575 96 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC009509.4-201ENST00000619202 509 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AP006248.2-201ENST00000623309 592 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 AC098679.4-201ENST00000624241 654 ntBASIC5.28□□□□□ -1.56
CNGA1P29973 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNGA1P29973 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CNGA1P29973 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CNGA1P29973 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CNGA1P29973 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
CNGA1P29973 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNGA1P29973 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.27□□□□□ -1.57
CNGA1P29973 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNGA1P29973 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CNGA1P29973 KPNA2P2-201ENST00000419546 1489 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms