Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AP003355.3-201ENST00000623465 114 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC006963.1-201ENST00000624003 1052 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 AC025263.3-201ENST00000622965 1396 ntBASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.22□□□□□ -1.89
CCNB1IP1Q9NPC3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CCNB1IP1Q9NPC3 MFSD8-213ENST00000641134 1327 ntBASIC3.21□□□□□ -1.89
CCNB1IP1Q9NPC3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 RPL7P26-201ENST00000333817 754 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 RN7SKP280-201ENST00000364196 304 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU1-64P-201ENST00000365443 163 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU6-444P-201ENST00000383988 108 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AL445189.1-201ENST00000405722 338 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC114973.1-201ENST00000429057 632 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 RPS7P2-201ENST00000435134 607 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 MTCO2P32-201ENST00000514865 403 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 MED28P5-201ENST00000528254 438 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC104229.1-201ENST00000561364 255 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC012182.1-201ENST00000570133 895 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AL669831.4-202ENST00000590817 238 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 BNIP3P4-201ENST00000604946 565 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AL365400.2-201ENST00000605604 902 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC016542.1-201ENST00000608259 493 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC239803.2-201ENST00000610161 430 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC068620.4-201ENST00000636730 1182 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 MTCO1P6-201ENST00000481192 1384 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 AC002546.1-201ENST00000588041 2504 ntBASIC3.21□□□□□ -1.9
CCNB1IP1Q9NPC3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU6-263P-201ENST00000363811 107 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 SNORA48.8-201ENST00000391324 134 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 RN7SKP202-201ENST00000410439 330 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 PTP4A1P3-201ENST00000433661 420 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AL645931.1-201ENST00000439737 410 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 RNFT1P2-201ENST00000443064 757 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 SSXP4-201ENST00000451349 245 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 ARPC3P2-201ENST00000457786 533 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 UBDP1-202ENST00000457888 382 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC092185.1-201ENST00000491371 97 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC108078.3-201ENST00000502633 489 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AP003385.6-201ENST00000531603 374 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC095057.3-201ENST00000567102 1157 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC103881.1-201ENST00000603476 538 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 KATNBL1P5-201ENST00000605015 517 ntBASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCNB1IP1Q9NPC3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU6-339P-201ENST00000384310 107 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU6-441P-201ENST00000384545 106 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 MT-TC-201ENST00000387405 66 ntBASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNB1IP1Q9NPC3 ATF1P1-201ENST00000406040 927 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms