Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC011460.1-201ENST00000636268 1834 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AL356292.1-201ENST00000283110 373 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 HMGN2P8-201ENST00000391458 268 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 RNA5SP38-201ENST00000410750 119 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 Z98742.3-201ENST00000418637 326 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 OR6K1P-201ENST00000456766 971 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AP003385.6-201ENST00000531603 374 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 AL160394.1-201ENST00000624765 724 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 TCP1P3-201ENST00000414406 1498 ntBASIC2.63□□□□□ -1.99
CHD8Q9HCK8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHD8Q9HCK8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 RNU6-392P-201ENST00000364926 101 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 MTCO1P52-201ENST00000433928 531 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 CR769767.1-201ENST00000436337 346 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 HAR1A.1-201ENST00000459583 118 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AL133271.1-201ENST00000538229 291 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC009101.1-201ENST00000568135 242 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC023813.4-201ENST00000607580 580 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 Y_RNA.224-201ENST00000364308 111 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 RNU6-707P-201ENST00000364647 95 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC108667.1-201ENST00000428618 249 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 CST9LP2-201ENST00000437612 320 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC092013.1-201ENST00000438795 332 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 ELOCP13-201ENST00000443934 329 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 RN7SL330P-201ENST00000469709 307 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 RPS26P3-201ENST00000470205 348 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 PRDX3P4-201ENST00000470828 747 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 MFSD8-245ENST00000641743 948 ntBASIC2.62□□□□□ -1.99
CHD8Q9HCK8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.62□□□□□ -1.99
CHD8Q9HCK8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 RPL5P16-201ENST00000471467 790 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 TRBV8-2-201ENST00000475637 270 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 RPL9P6-201ENST00000492764 598 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 OR5AP1P-201ENST00000529730 940 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 SKP1P1-201ENST00000438081 489 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AL162389.1-201ENST00000449233 177 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 PSMA3P-201ENST00000555485 635 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AL731537.2-201ENST00000561565 951 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AL354943.1-201ENST00000572103 781 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AC007621.1-201ENST00000604544 437 ntBASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHD8Q9HCK8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.6□□□□□ -1.99
CHD8Q9HCK8 RNU1-17P-201ENST00000363022 152 ntBASIC2.6□□□□□ -1.99
CHD8Q9HCK8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.6□□□□□ -1.99
CHD8Q9HCK8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.6□□□□□ -1.99
CHD8Q9HCK8 GNAI2P1-201ENST00000541815 315 ntBASIC2.6□□□□□ -1.99
CHD8Q9HCK8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.6□□□□□ -1.99
CHD8Q9HCK8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms