Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCNFP41002 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNFP41002 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCNFP41002 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNFP41002 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.4□□□□□ -1.54
CCNFP41002 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNFP41002 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCNFP41002 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNFP41002 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCNFP41002 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCNFP41002 RNU6-108P-201ENST00000365558 107 ntBASIC5.4□□□□□ -1.54
CCNFP41002 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCNFP41002 RPL21P67-201ENST00000402896 478 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AL356432.1-201ENST00000405809 419 ntBASIC5.4□□□□□ -1.54
CCNFP41002 OR6E1P-201ENST00000414424 923 ntBASIC5.4□□□□□ -1.54
CCNFP41002 PDCL2P1-201ENST00000419302 352 ntBASIC5.4□□□□□ -1.54
CCNFP41002 SAGE2P-201ENST00000420011 2126 ntBASIC5.4□□□□□ -1.54
CCNFP41002 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.4□□□□□ -1.54
CCNFP41002 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.4□□□□□ -1.54
CCNFP41002 RPL35AP12-201ENST00000425362 338 ntBASIC5.4□□□□□ -1.54
CCNFP41002 RBMY2QP-201ENST00000429799 1147 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 OR6D1P-201ENST00000436165 939 ntBASIC5.4□□□□□ -1.54
CCNFP41002 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.4□□□□□ -1.54
CCNFP41002 RPL7P12-201ENST00000446719 750 ntBASIC5.4□□□□□ -1.54
CCNFP41002 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 AC245028.2-201ENST00000458673 253 ntBASIC5.4□□□□□ -1.54
CCNFP41002 RPS20P21-201ENST00000466859 343 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AC233702.1-201ENST00000482905 502 ntBASIC5.4□□□□□ -1.54
CCNFP41002 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.4□□□□□ -1.54
CCNFP41002 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 AC106872.4-201ENST00000510050 523 ntBASIC5.4□□□□□ -1.54
CCNFP41002 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 SNORA40.12-201ENST00000516329 111 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AC090572.1-201ENST00000519251 160 ntBASIC5.4□□□□□ -1.54
CCNFP41002 IGKV3D-34-201ENST00000522638 302 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AC100784.1-201ENST00000522790 310 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.4□□□□□ -1.54
CCNFP41002 AC078814.3-201ENST00000553036 491 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AC022404.1-201ENST00000555320 273 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AC087477.6-201ENST00000559595 843 ntBASIC5.4□□□□□ -1.54
CCNFP41002 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNFP41002 MIR3936-201ENST00000584304 110 ntBASIC5.4□□□□□ -1.54
CCNFP41002 YWHAQP7-201ENST00000603536 658 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AL049794.2-201ENST00000616301 365 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AC015908.5-201ENST00000623289 343 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AL159972.1-201ENST00000625150 448 ntBASIC5.4□□□□□ -1.54
CCNFP41002 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNFP41002 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
CCNFP41002 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CCNFP41002 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.4□□□□□ -1.55
CCNFP41002 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNFP41002 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNFP41002 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNFP41002 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNFP41002 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.39□□□□□ -1.55
CCNFP41002 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.39□□□□□ -1.55
CCNFP41002 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNFP41002 Y_RNA.58-201ENST00000362807 102 ntBASIC5.39□□□□□ -1.55
CCNFP41002 RNU6-1097P-201ENST00000363586 107 ntBASIC5.39□□□□□ -1.55
CCNFP41002 Y_RNA.154-201ENST00000363624 102 ntBASIC5.39□□□□□ -1.55
CCNFP41002 RNY3P1-201ENST00000365085 102 ntBASIC5.39□□□□□ -1.55
CCNFP41002 RNY3-201ENST00000365484 102 ntBASIC5.39□□□□□ -1.55
CCNFP41002 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.39□□□□□ -1.55
CCNFP41002 Y_RNA.490-201ENST00000384413 102 ntBASIC5.39□□□□□ -1.55
CCNFP41002 Z97832.1-201ENST00000402490 328 ntBASIC5.39□□□□□ -1.55
CCNFP41002 ARL4AP5-201ENST00000404372 599 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AL162578.1-201ENST00000406202 378 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNFP41002 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNFP41002 AL590609.2-201ENST00000421430 368 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC092832.1-201ENST00000422934 400 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNFP41002 AL365400.1-201ENST00000431854 640 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AL356276.2-201ENST00000435919 558 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC012075.1-201ENST00000436549 580 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AL138799.3-201ENST00000438968 350 ntBASIC5.39□□□□□ -1.55
CCNFP41002 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.39□□□□□ -1.55
CCNFP41002 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.39□□□□□ -1.55
CCNFP41002 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AP001992.1-205ENST00000462248 379 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC006512.1-201ENST00000468816 291 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC078785.3-201ENST00000476607 425 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC055855.1-201ENST00000489563 579 ntBASIC5.39□□□□□ -1.55
CCNFP41002 RPL7P51-201ENST00000490532 749 ntBASIC5.39□□□□□ -1.55
CCNFP41002 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNFP41002 GAPDHP56-201ENST00000506031 988 ntBASIC5.39□□□□□ -1.55
CCNFP41002 SCARNA24.1-201ENST00000516465 137 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms