Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CD44P16070 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.62□□□□□ -1.19
CD44P16070 AC100810.3-201ENST00000633189 2240 ntBASIC7.62□□□□□ -1.19
CD44P16070 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.62□□□□□ -1.19
CD44P16070 AC008758.3-201ENST00000507003 1829 ntBASIC7.62□□□□□ -1.19
CD44P16070 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.61□□□□□ -1.19
CD44P16070 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 AP000866.6-201ENST00000638898 3579 ntBASIC7.61□□□□□ -1.19
CD44P16070 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CD44P16070 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.61□□□□□ -1.19
CD44P16070 PABPC1P8-201ENST00000452851 2086 ntBASIC7.61□□□□□ -1.19
CD44P16070 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.61□□□□□ -1.19
CD44P16070 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CD44P16070 SNORA40.5-201ENST00000391061 128 ntBASIC7.61□□□□□ -1.19
CD44P16070 RNU6ATAC16P-201ENST00000408591 138 ntBASIC7.61□□□□□ -1.19
CD44P16070 AC068138.1-201ENST00000412635 217 ntBASIC7.61□□□□□ -1.19
CD44P16070 RPL36P19-201ENST00000430744 301 ntBASIC7.61□□□□□ -1.19
CD44P16070 U8.21-201ENST00000459536 136 ntBASIC7.61□□□□□ -1.19
CD44P16070 RPL21P13-201ENST00000488305 481 ntBASIC7.61□□□□□ -1.19
CD44P16070 HMGB1P21-201ENST00000502313 581 ntBASIC7.61□□□□□ -1.19
CD44P16070 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.61□□□□□ -1.19
CD44P16070 RN7SKP11-201ENST00000517018 287 ntBASIC7.61□□□□□ -1.19
CD44P16070 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC7.61□□□□□ -1.19
CD44P16070 AC007537.1-201ENST00000539347 327 ntBASIC7.61□□□□□ -1.19
CD44P16070 MIR5095-201ENST00000578844 88 ntBASIC7.61□□□□□ -1.19
CD44P16070 LRRC37A5P-203ENST00000580181 585 ntBASIC7.61□□□□□ -1.19
CD44P16070 MIR4258-201ENST00000580920 91 ntBASIC7.61□□□□□ -1.19
CD44P16070 AC092960.1-201ENST00000604762 351 ntBASIC7.61□□□□□ -1.19
CD44P16070 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
CD44P16070 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CD44P16070 MIR6807-201ENST00000621968 92 ntBASIC7.61□□□□□ -1.19
CD44P16070 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.61□□□□□ -1.19
CD44P16070 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 AL451142.2-201ENST00000429076 2090 ntBASIC7.61□□□□□ -1.19
CD44P16070 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.61□□□□□ -1.19
CD44P16070 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CD44P16070 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
CD44P16070 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC7.6□□□□□ -1.19
CD44P16070 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.6□□□□□ -1.19
CD44P16070 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.6□□□□□ -1.19
CD44P16070 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 RNU6-573P-201ENST00000383938 106 ntBASIC7.6□□□□□ -1.19
CD44P16070 MIR541-201ENST00000401360 84 ntBASIC7.6□□□□□ -1.19
CD44P16070 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.6□□□□□ -1.19
CD44P16070 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.6□□□□□ -1.19
CD44P16070 U3.35-201ENST00000408405 208 ntBASIC7.6□□□□□ -1.19
CD44P16070 RNU2-5P-201ENST00000410533 180 ntBASIC7.6□□□□□ -1.19
CD44P16070 BX323845.2-201ENST00000458382 234 ntBASIC7.6□□□□□ -1.19
CD44P16070 AC068522.1-201ENST00000482895 345 ntBASIC7.6□□□□□ -1.19
CD44P16070 AC083795.1-201ENST00000491760 320 ntBASIC7.6□□□□□ -1.19
CD44P16070 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.6□□□□□ -1.19
CD44P16070 AC104057.1-201ENST00000515547 497 ntBASIC7.6□□□□□ -1.19
CD44P16070 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.6□□□□□ -1.19
CD44P16070 AC087752.2-201ENST00000521219 281 ntBASIC7.6□□□□□ -1.19
CD44P16070 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.6□□□□□ -1.19
CD44P16070 AP005403.1-201ENST00000579720 229 ntBASIC7.6□□□□□ -1.19
CD44P16070 MIR1273F-201ENST00000580581 99 ntBASIC7.6□□□□□ -1.19
CD44P16070 AC090774.2-201ENST00000584708 322 ntBASIC7.6□□□□□ -1.19
CD44P16070 AC020914.7-201ENST00000594477 545 ntBASIC7.6□□□□□ -1.19
CD44P16070 AL161931.1-201ENST00000612768 246 ntBASIC7.6□□□□□ -1.19
CD44P16070 AL355480.4-201ENST00000626823 69 ntBASIC7.6□□□□□ -1.19
CD44P16070 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 AC022905.1-201ENST00000503430 3048 ntBASIC7.6□□□□□ -1.19
CD44P16070 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CD44P16070 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC7.6□□□□□ -1.19
CD44P16070 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.6□□□□□ -1.19
CD44P16070 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CD44P16070 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.6□□□□□ -1.19
CD44P16070 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CD44P16070 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
CD44P16070 AC125603.4-201ENST00000621942 2699 ntBASIC7.59□□□□□ -1.19
CD44P16070 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms