Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RIPK2O43353 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.56□□□□□ -1.84
RIPK2O43353 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 RNA5SP317-201ENST00000410176 116 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 RNA5SP311-201ENST00000411290 116 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 BX890604.2-201ENST00000427883 474 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 MTATP6P11-201ENST00000428071 670 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 AL133162.1-201ENST00000463228 453 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 RPL23AP44-201ENST00000482216 473 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 TPT1P3-201ENST00000492841 512 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 RNA5SP315-201ENST00000516340 116 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 RNA5SP312-201ENST00000517068 116 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.56□□□□□ -1.84
RIPK2O43353 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.56□□□□□ -1.84
RIPK2O43353 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.56□□□□□ -1.84
RIPK2O43353 SNORD84-203ENST00000584275 78 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 XIAPP1-201ENST00000603162 600 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 AC009948.4-201ENST00000604692 675 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 AC005962.2-201ENST00000611427 652 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 AC005344.1-201ENST00000613391 459 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
RIPK2O43353 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK2O43353 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK2O43353 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK2O43353 AC091948.2-201ENST00000636510 279 ntBASIC3.56□□□□□ -1.84
RIPK2O43353 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.56□□□□□ -1.84
RIPK2O43353 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK2O43353 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK2O43353 AC130650.2-201ENST00000618736 2403 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC007823.1-201ENST00000569932 1566 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC092326.2-201ENST00000624772 1561 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK2O43353 SGO1P1-201ENST00000603525 1447 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RIPK2O43353 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
RIPK2O43353 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RIPK2O43353 MFSD8-236ENST00000641509 4050 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RIPK2O43353 RNU1-32P-201ENST00000363937 159 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 SNORA73.2-201ENST00000364946 201 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 SNORA62-201ENST00000365493 153 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK2O43353 MIR30B-201ENST00000384850 88 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 RPS3AP26-201ENST00000398259 784 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 TMSB4XP8-201ENST00000402089 135 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.55□□□□□ -1.84
RIPK2O43353 TMSB4XP6-201ENST00000415187 135 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AL158050.1-201ENST00000416077 457 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK2O43353 TMSB4XP1-201ENST00000424567 135 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK2O43353 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK2O43353 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK2O43353 RPL23AP22-201ENST00000437556 453 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK2O43353 GTF2IP12-201ENST00000456547 356 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.55□□□□□ -1.84
RIPK2O43353 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC017015.1-201ENST00000477387 286 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AL139099.1-201ENST00000497398 403 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC021146.5-201ENST00000503544 545 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 TXNP6-201ENST00000510190 310 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK2O43353 AC010265.1-201ENST00000513509 211 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AC107934.2-201ENST00000518653 310 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AP000916.1-201ENST00000533869 835 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.55□□□□□ -1.84
RIPK2O43353 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK2O43353 AC087481.2-201ENST00000565492 330 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.55□□□□□ -1.84
RIPK2O43353 AL023583.1-201ENST00000607518 1143 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 MLECP1-201ENST00000615893 709 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK2O43353 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK2O43353 AL360181.4-201ENST00000621752 134 ntBASIC3.55□□□□□ -1.84
RIPK2O43353 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.55□□□□□ -1.84
RIPK2O43353 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.55□□□□□ -1.84
RIPK2O43353 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.55□□□□□ -1.84
RIPK2O43353 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RIPK2O43353 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
RIPK2O43353 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK2O43353 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms