Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC079597.1-201ENST00000624306 508 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AL078596.1-201ENST00000624856 447 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC107027.3-201ENST00000565095 3473 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC235565.1-201ENST00000456962 1325 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC109446.4-201ENST00000623235 2755 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 AC011460.1-201ENST00000636268 1834 ntBASIC5.95□□□□□ -1.46
CNTN3Q9P232 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 MIR1286-201ENST00000408112 78 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 RPSAP35-201ENST00000413753 818 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC012065.2-201ENST00000421295 375 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AL355433.1-201ENST00000422804 300 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AL354766.1-201ENST00000423396 542 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AZGP1P2-201ENST00000454506 345 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC027575.1-201ENST00000481064 460 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC021146.1-201ENST00000511202 716 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 Y_RNA.711-201ENST00000516993 102 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 SNORA25.17-201ENST00000517184 124 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 GLUD1P4-201ENST00000590914 418 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 DPPA3P3-201ENST00000603842 430 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AP001330.4-201ENST00000604350 154 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AP001521.2-201ENST00000608772 546 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC037198.3-201ENST00000616754 526 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 AL158196.1-201ENST00000616786 434 ntBASIC5.94□□□□□ -1.46
CNTN3Q9P232 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CNTN3Q9P232 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CNTN3Q9P232 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC083899.1-201ENST00000454465 3819 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC005332.5-201ENST00000591222 2919 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 MIR133B-201ENST00000362210 119 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 SNORA16A-201ENST00000384342 137 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 RNU1-77P-201ENST00000390868 162 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 MIR1178-201ENST00000408396 91 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 OR1AA1P-201ENST00000419597 916 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 SRSF1P1-201ENST00000424058 520 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 CYCSP6-201ENST00000434498 302 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AL353597.2-202ENST00000434901 373 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AL163193.1-201ENST00000444895 788 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 EEF1A1P1-201ENST00000447052 739 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 OR2AO1P-201ENST00000476497 403 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC068587.1-201ENST00000483613 781 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AL163540.1-201ENST00000485382 386 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC024558.1-201ENST00000505008 528 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 TTC39CP1-201ENST00000512513 755 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 RNU6-559P-201ENST00000516151 98 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC011979.2-201ENST00000527568 352 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC008737.2-201ENST00000599446 118 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AL512782.1-201ENST00000603093 364 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms