Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 SMG1P6-201ENST00000532337 2930 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD11P31277 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 MIR514A1-201ENST00000385133 98 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 RN7SKP61-201ENST00000410642 295 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 OSBPL10-AS1-201ENST00000417313 475 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD11P31277 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 PPIAP20-201ENST00000449839 135 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 RN7SL221P-201ENST00000466190 281 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD11P31277 IGKV3-31-201ENST00000523109 329 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 AC021006.3-201ENST00000530771 192 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 AC093249.3-201ENST00000562444 424 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.17□□□□□ -1.1
HOXD11P31277 AC020895.1-201ENST00000595362 272 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD11P31277 BIN2P1-201ENST00000504996 1530 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HOXD11P31277 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 AC005224.3-201ENST00000584683 2140 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 AC022325.1-201ENST00000502748 2199 ntBASIC8.17□□□□□ -1.1
HOXD11P31277 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HOXD11P31277 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD11P31277 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD11P31277 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD11P31277 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD11P31277 Y_RNA.415-201ENST00000384012 112 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 U1.1-201ENST00000384101 164 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 MIR544A-201ENST00000384855 91 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 RPL21P3-201ENST00000395517 478 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 MIR1278-201ENST00000408753 81 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 RNA5SP31-201ENST00000411144 127 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.16□□□□□ -1.1
HOXD11P31277 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC8.16□□□□□ -1.1
HOXD11P31277 RN7SL414P-201ENST00000469545 294 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 RN7SL170P-201ENST00000487098 295 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.16□□□□□ -1.1
HOXD11P31277 RNU6-1018P-201ENST00000516577 106 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.16□□□□□ -1.1
HOXD11P31277 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD11P31277 LINC00294-201ENST00000631190 3306 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 MAPK10-313ENST00000641405 2469 ntBASIC8.16□□□□□ -1.1
HOXD11P31277 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
HOXD11P31277 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.16□□□□□ -1.1
HOXD11P31277 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD11P31277 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXD11P31277 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXD11P31277 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD11P31277 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXD11P31277 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD11P31277 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD11P31277 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD11P31277 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXD11P31277 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXD11P31277 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
HOXD11P31277 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXD11P31277 Y_RNA.73-201ENST00000362910 113 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 SNORD56.1-201ENST00000362913 68 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 RNA5SP378-201ENST00000363646 120 ntBASIC8.15□□□□□ -1.1
HOXD11P31277 RNU6-1240P-201ENST00000365155 104 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms