Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
RNF40O75150 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF40O75150 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
RNF40O75150 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF40O75150 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
RNF40O75150 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
RNF40O75150 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
RNF40O75150 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF40O75150 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF40O75150 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.86□□□□□ -1.31
RNF40O75150 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF40O75150 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 Z97989.1-201ENST00000531702 2421 ntBASIC6.86□□□□□ -1.31
RNF40O75150 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF40O75150 PPIAP24-201ENST00000328558 471 ntBASIC6.86□□□□□ -1.31
RNF40O75150 MIR335-201ENST00000362173 94 ntBASIC6.86□□□□□ -1.31
RNF40O75150 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.86□□□□□ -1.31
RNF40O75150 RNU6-188P-201ENST00000364207 107 ntBASIC6.86□□□□□ -1.31
RNF40O75150 RNA5SP485-201ENST00000365053 119 ntBASIC6.86□□□□□ -1.31
RNF40O75150 RNU1-55P-201ENST00000365510 158 ntBASIC6.86□□□□□ -1.31
RNF40O75150 U3.52-201ENST00000384034 216 ntBASIC6.86□□□□□ -1.31
RNF40O75150 RNA5SP431-201ENST00000410312 120 ntBASIC6.86□□□□□ -1.31
RNF40O75150 RNU6-121P-201ENST00000410525 99 ntBASIC6.86□□□□□ -1.31
RNF40O75150 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF40O75150 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 RNU7-167P-201ENST00000459160 62 ntBASIC6.86□□□□□ -1.31
RNF40O75150 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF40O75150 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF40O75150 IGLVIV-64-201ENST00000518581 301 ntBASIC6.86□□□□□ -1.31
RNF40O75150 AC125612.1-201ENST00000547580 377 ntBASIC6.86□□□□□ -1.31
RNF40O75150 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF40O75150 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF40O75150 SDR42E1P1-201ENST00000611327 477 ntBASIC6.86□□□□□ -1.31
RNF40O75150 MIR7854-201ENST00000620068 65 ntBASIC6.86□□□□□ -1.31
RNF40O75150 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF40O75150 AC005725.1-201ENST00000577346 2607 ntBASIC6.86□□□□□ -1.31
RNF40O75150 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
RNF40O75150 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF40O75150 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF40O75150 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF40O75150 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF40O75150 RACGAP1P-201ENST00000550663 1879 ntBASIC6.85□□□□□ -1.31
RNF40O75150 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RNF40O75150 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF40O75150 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF40O75150 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RNF40O75150 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 RN7SKP15-201ENST00000364742 309 ntBASIC6.85□□□□□ -1.31
RNF40O75150 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
RNF40O75150 RNU6-398P-201ENST00000384143 109 ntBASIC6.85□□□□□ -1.31
RNF40O75150 RNU6-48P-201ENST00000384161 107 ntBASIC6.85□□□□□ -1.31
RNF40O75150 RNA5SP122-201ENST00000384457 108 ntBASIC6.85□□□□□ -1.31
RNF40O75150 MRPS21P5-201ENST00000417885 231 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AL389925.1-201ENST00000432257 728 ntBASIC6.85□□□□□ -1.31
RNF40O75150 UBBP5-201ENST00000446970 266 ntBASIC6.85□□□□□ -1.31
RNF40O75150 RN7SL39P-201ENST00000462264 297 ntBASIC6.85□□□□□ -1.31
RNF40O75150 FTH1P2-201ENST00000466086 412 ntBASIC6.85□□□□□ -1.31
RNF40O75150 RN7SL101P-201ENST00000496350 279 ntBASIC6.85□□□□□ -1.31
RNF40O75150 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF40O75150 AC083906.1-201ENST00000509298 406 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AL390198.2-201ENST00000510553 222 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AC016559.2-201ENST00000510759 359 ntBASIC6.85□□□□□ -1.31
RNF40O75150 RNU6-397P-201ENST00000516226 104 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AC007991.1-201ENST00000522680 631 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF40O75150 RPA2P3-201ENST00000533268 770 ntBASIC6.85□□□□□ -1.31
RNF40O75150 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF40O75150 AC090615.1-201ENST00000577519 154 ntBASIC6.85□□□□□ -1.31
RNF40O75150 CTSLP2-201ENST00000580501 394 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AC114477.1-201ENST00000605097 605 ntBASIC6.85□□□□□ -1.31
RNF40O75150 FAM27E4-201ENST00000605259 342 ntBASIC6.85□□□□□ -1.31
RNF40O75150 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 AL589743.6-201ENST00000611025 117 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AL159153.1-201ENST00000619688 317 ntBASIC6.85□□□□□ -1.31
RNF40O75150 AC000123.2-201ENST00000623124 461 ntBASIC6.85□□□□□ -1.31
RNF40O75150 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF40O75150 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF40O75150 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF40O75150 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms