Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 MAPK10-362ENST00000641864 4484 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 U8.13-201ENST00000390842 128 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 HMGN2P8-201ENST00000391458 268 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 RNU6-516P-201ENST00000411381 104 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC005005.2-201ENST00000420779 380 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC000403.1-201ENST00000613696 3585 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC005005.4-201ENST00000623789 16698 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 GABPAP-201ENST00000419271 1356 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 RNU6-707P-201ENST00000364647 95 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC108751.2-201ENST00000469993 231 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 RN7SKP272-201ENST00000516988 232 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC103810.6-201ENST00000606708 136 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC016590.3-201ENST00000611171 753 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 FRG1BP-201ENST00000278882 761 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SNORA71.1-201ENST00000364523 117 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 BTF3P7-201ENST00000407097 488 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 RNA5SP21-201ENST00000410917 96 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 PSPHP1-201ENST00000450062 261 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 RN7SKP248-201ENST00000516278 305 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 RNA5SP187-201ENST00000384400 119 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 SETP9-201ENST00000423837 832 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 TRBV26-201ENST00000456572 344 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC092798.1-201ENST00000458542 409 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.23□□□□□ -2.21
MACF1Q9UPN3 NIFKP6-201ENST00000598115 845 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 AC010889.1-201ENST00000566193 2666 ntBASIC1.23□□□□□ -2.21
MACF1Q9UPN3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 NANOGP6-201ENST00000429190 847 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 HMGB1P48-201ENST00000446155 598 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RNA5SP148-201ENST00000516527 94 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC025881.1-201ENST00000518851 512 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC068020.1-201ENST00000594215 661 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 LUZP4P1-201ENST00000415420 344 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RPL7P54-201ENST00000438336 674 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC008716.1-201ENST00000511084 513 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RNU6-579P-201ENST00000516879 102 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 MIR7973-1-201ENST00000614683 76 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC110754.1-201ENST00000399740 601 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 MTND4LP17-201ENST00000414607 293 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MACF1Q9UPN3 RPL23AP35-201ENST00000451906 501 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 MTCO3P44-201ENST00000510977 541 ntBASIC1.22□□□□□ -2.21
MACF1Q9UPN3 AC005798.1-201ENST00000513715 387 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms