Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC010401.2-201ENST00000575137 4934 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 Y_RNA.286-201ENST00000364813 102 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 Y_RNA.357-201ENST00000365487 109 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 MIR539-201ENST00000365690 78 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC019155.1-201ENST00000382242 574 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 SNORA3.1-201ENST00000408166 111 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 RNU4-65P-201ENST00000410473 140 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 TMSB10P2-201ENST00000416049 131 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 OOSP1P1-201ENST00000423265 274 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 RN7SL160P-201ENST00000468558 284 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 MTND3P25-201ENST00000509243 135 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 SNORA27.4-201ENST00000516650 95 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 RNA5SP441-201ENST00000516809 88 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 RNU6-1234P-201ENST00000516877 103 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 RNU6-352P-201ENST00000516908 107 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC090022.1-201ENST00000546569 311 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC011476.5-201ENST00000615594 130 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AC126773.4-201ENST00000612545 3043 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 AL031119.1-201ENST00000404707 1879 ntBASIC6.66□□□□□ -1.34
LHX6Q9UPM6 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX6Q9UPM6 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AL445487.1-201ENST00000415694 1580 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC083843.3-201ENST00000623679 2186 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 RNU6-818P-201ENST00000364837 108 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 LCN1P2-201ENST00000372030 223 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 SNORA12.2-201ENST00000391040 156 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 PRELID1P1-201ENST00000403549 660 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 U3.35-201ENST00000408405 208 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 GAPDHP59-201ENST00000435908 267 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC004938.1-201ENST00000438468 308 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 RN7SL870P-201ENST00000460111 296 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC104164.1-201ENST00000460282 590 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 RN7SKP60-201ENST00000516985 239 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 RNA5SP400-201ENST00000517155 111 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC104581.2-201ENST00000572227 430 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC009318.2-201ENST00000610917 651 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 MIR8076-201ENST00000611401 83 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 TUG1_2.1-201ENST00000614234 87 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 AC025162.2-201ENST00000619602 560 ntBASIC6.65□□□□□ -1.34
LHX6Q9UPM6 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
LHX6Q9UPM6 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
LHX6Q9UPM6 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms