Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13CQ709C8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13CQ709C8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 AC113430.1-201ENST00000506872 718 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 RNA5SP217-201ENST00000515959 91 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 AC022031.1-201ENST00000585985 2593 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13CQ709C8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13CQ709C8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13CQ709C8 RNA5SP508-201ENST00000411327 119 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 HMGB3P12-201ENST00000438745 556 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 OR5AK3P-201ENST00000527486 1297 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 AL391156.1-201ENST00000554965 554 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13CQ709C8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13CQ709C8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 SNORD56.3-201ENST00000363507 71 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 MIR499A-201ENST00000384903 122 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 RN7SKP58-201ENST00000411010 305 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 OR4G11P-201ENST00000492842 939 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS13CQ709C8 AC015712.3-201ENST00000559380 164 ntBASIC2.2□□□□□ -2.06
VPS13CQ709C8 AC096644.4-201ENST00000563417 2912 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC005261.6-201ENST00000623072 1387 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 RPS26P40-201ENST00000435209 294 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 AP001317.1-201ENST00000531194 960 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 AP005262.1-201ENST00000582646 997 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 CR381653.2-201ENST00000624041 768 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 PISRT1-201ENST00000626175 531 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 SYT14P1-202ENST00000600441 1448 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 SNORA36C-201ENST00000384289 132 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 SNORA46-201ENST00000384762 135 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 HMGB1P48-201ENST00000446155 598 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 ST13P14-201ENST00000474095 734 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 RN7SKP272-201ENST00000516988 232 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 SEC11B-201ENST00000518383 499 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 OR4K7P-201ENST00000580232 945 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 AL359715.5-201ENST00000623431 443 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC027290.2-201ENST00000623210 18662 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13CQ709C8 RPS7P13-201ENST00000413955 498 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 SCARNA17.1-201ENST00000516211 143 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 SCARNA17.2-201ENST00000516334 143 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 OR1AB1P-201ENST00000585564 761 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC007938.3-201ENST00000604965 623 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 SCARNA17.4-201ENST00000614296 143 ntBASIC2.19□□□□□ -2.06
VPS13CQ709C8 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13CQ709C8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13CQ709C8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 BTF3P7-201ENST00000407097 488 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 CYCSP20-201ENST00000473154 315 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 NF1P10-201ENST00000613227 742 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 MIR27B-201ENST00000385129 97 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 AL359511.1-201ENST00000402970 211 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms