Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-1069P-201ENST00000516612 133 ntBASIC5.8□□□□□ -1.48
THBS1P07996 RNU6-111P-201ENST00000517179 105 ntBASIC5.8□□□□□ -1.48
THBS1P07996 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.8□□□□□ -1.48
THBS1P07996 TRIM77BP-201ENST00000524985 1119 ntBASIC5.8□□□□□ -1.48
THBS1P07996 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.8□□□□□ -1.48
THBS1P07996 AC022080.3-201ENST00000544433 482 ntBASIC5.8□□□□□ -1.48
THBS1P07996 AC091516.1-201ENST00000549191 703 ntBASIC5.8□□□□□ -1.48
THBS1P07996 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.8□□□□□ -1.48
THBS1P07996 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
THBS1P07996 AC024619.4-201ENST00000580924 316 ntBASIC5.8□□□□□ -1.48
THBS1P07996 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.8□□□□□ -1.48
THBS1P07996 AC011494.1-201ENST00000596454 237 ntBASIC5.8□□□□□ -1.48
THBS1P07996 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.8□□□□□ -1.48
THBS1P07996 AC009779.6-201ENST00000603972 165 ntBASIC5.8□□□□□ -1.48
THBS1P07996 DUSP12P1-201ENST00000612874 516 ntBASIC5.8□□□□□ -1.48
THBS1P07996 SDR42E1P2-201ENST00000614861 481 ntBASIC5.8□□□□□ -1.48
THBS1P07996 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.8□□□□□ -1.48
THBS1P07996 SNORA11.6-201ENST00000619030 128 ntBASIC5.8□□□□□ -1.48
THBS1P07996 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
THBS1P07996 SDR42E1P4-201ENST00000620894 481 ntBASIC5.8□□□□□ -1.48
THBS1P07996 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
THBS1P07996 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.8□□□□□ -1.48
THBS1P07996 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.8□□□□□ -1.48
THBS1P07996 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
THBS1P07996 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
THBS1P07996 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
THBS1P07996 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
THBS1P07996 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.8□□□□□ -1.48
THBS1P07996 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 LINC02019-201ENST00000608605 2060 ntBASIC5.79□□□□□ -1.48
THBS1P07996 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 AC005225.5-201ENST00000623547 2225 ntBASIC5.79□□□□□ -1.48
THBS1P07996 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
THBS1P07996 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
THBS1P07996 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 Y_RNA.20-201ENST00000362479 113 ntBASIC5.79□□□□□ -1.48
THBS1P07996 RN7SKP115-201ENST00000363177 317 ntBASIC5.79□□□□□ -1.48
THBS1P07996 RNU6-190P-201ENST00000384154 102 ntBASIC5.79□□□□□ -1.48
THBS1P07996 RNU6-432P-201ENST00000384196 109 ntBASIC5.79□□□□□ -1.48
THBS1P07996 Y_RNA.473-201ENST00000384333 102 ntBASIC5.79□□□□□ -1.48
THBS1P07996 SNORA70.9-201ENST00000384370 135 ntBASIC5.79□□□□□ -1.48
THBS1P07996 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
THBS1P07996 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
THBS1P07996 AP000580.1-201ENST00000404439 358 ntBASIC5.79□□□□□ -1.48
THBS1P07996 RPL30P2-201ENST00000414021 291 ntBASIC5.79□□□□□ -1.48
THBS1P07996 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 AL138899.2-201ENST00000439139 499 ntBASIC5.79□□□□□ -1.48
THBS1P07996 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.79□□□□□ -1.48
THBS1P07996 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.79□□□□□ -1.48
THBS1P07996 RANP2-201ENST00000456833 229 ntBASIC5.79□□□□□ -1.48
THBS1P07996 RN7SL369P-201ENST00000477138 299 ntBASIC5.79□□□□□ -1.48
THBS1P07996 RN7SL326P-201ENST00000477493 296 ntBASIC5.79□□□□□ -1.48
THBS1P07996 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 AC093664.1-201ENST00000511779 289 ntBASIC5.79□□□□□ -1.48
THBS1P07996 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.79□□□□□ -1.48
THBS1P07996 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.79□□□□□ -1.48
THBS1P07996 SNORA40.15-201ENST00000516884 107 ntBASIC5.79□□□□□ -1.48
THBS1P07996 FAM60DP-201ENST00000524174 632 ntBASIC5.79□□□□□ -1.48
THBS1P07996 AC040926.1-201ENST00000530195 238 ntBASIC5.79□□□□□ -1.48
THBS1P07996 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.79□□□□□ -1.48
THBS1P07996 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 SETP7-201ENST00000552169 453 ntBASIC5.79□□□□□ -1.48
THBS1P07996 AC007494.1-201ENST00000562293 760 ntBASIC5.79□□□□□ -1.48
THBS1P07996 AC007342.5-201ENST00000571340 2142 ntBASIC5.79□□□□□ -1.48
THBS1P07996 OR1E3-201ENST00000575608 948 ntBASIC5.79□□□□□ -1.48
THBS1P07996 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 MIR4732-201ENST00000581873 76 ntBASIC5.79□□□□□ -1.48
THBS1P07996 RN7SL475P-201ENST00000583379 298 ntBASIC5.79□□□□□ -1.48
THBS1P07996 NPIPB1P-202ENST00000588786 828 ntBASIC5.79□□□□□ -1.48
THBS1P07996 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.79□□□□□ -1.48
THBS1P07996 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.79□□□□□ -1.48
THBS1P07996 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
THBS1P07996 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 ZNF33CP-201ENST00000432492 2030 ntBASIC5.79□□□□□ -1.48
THBS1P07996 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
THBS1P07996 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.78□□□□□ -1.48
THBS1P07996 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
THBS1P07996 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.78□□□□□ -1.48
THBS1P07996 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
THBS1P07996 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
THBS1P07996 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.78□□□□□ -1.48
THBS1P07996 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
THBS1P07996 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.78□□□□□ -1.48
THBS1P07996 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
THBS1P07996 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms