Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC026241.1-201ENST00000517873 2142 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC007993.1-201ENST00000621298 2430 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CICP22-201ENST00000432801 1319 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 IDSP1-201ENST00000324799 376 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 Y_RNA.40-201ENST00000362645 93 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 PRRG3-202ENST00000370354 650 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 DCTN3-204ENST00000378913 951 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR520G-201ENST00000385064 90 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR802-201ENST00000390235 94 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AL445646.1-201ENST00000431784 216 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC245036.2-201ENST00000433549 287 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC079355.2-201ENST00000440057 190 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL19P-201ENST00000462522 306 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL69P-201ENST00000468423 272 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 MBL1P-202ENST00000497731 758 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ATP5G1-209ENST00000514808 359 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SCGB1D5P-201ENST00000515134 247 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU7-156P-201ENST00000517214 74 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC087664.3-201ENST00000524110 328 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AL929601.1-202ENST00000551067 418 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC005519.1-201ENST00000554490 601 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 FOXC2-AS1-201ENST00000563280 319 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC016168.2-202ENST00000564292 610 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC006130.2-201ENST00000586202 326 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 IGFL1P2-201ENST00000593820 330 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 LYPLA2P2-201ENST00000600506 676 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC096577.2-201ENST00000611455 153 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 HIST1H2BB-201ENST00000615966 381 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC138894.4-201ENST00000616703 256 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AL023881.1-201ENST00000621088 301 ntBASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC011815.1-201ENST00000586922 4382 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SELE-203ENST00000367775 3389 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 KCNMA1-228ENST00000638223 4340 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms