Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HPS3Q969F9 MIR320C1-201ENST00000408566 88 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 AL139095.3-201ENST00000419672 1203 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 FNDC3CP-201ENST00000420795 1155 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.97□□□□□ -1.61
HPS3Q969F9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.97□□□□□ -1.61
HPS3Q969F9 KCTD10P1-201ENST00000434203 625 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.97□□□□□ -1.61
HPS3Q969F9 PAXBP1P1-201ENST00000449315 447 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 BX276092.4-201ENST00000452056 248 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.97□□□□□ -1.61
HPS3Q969F9 RNU7-136P-201ENST00000458819 69 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 RPL30P9-201ENST00000465586 330 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.97□□□□□ -1.61
HPS3Q969F9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 AC090453.1-201ENST00000495560 436 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.97□□□□□ -1.61
HPS3Q969F9 MTCO3P7-201ENST00000510008 774 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.97□□□□□ -1.61
HPS3Q969F9 AC016065.2-201ENST00000514530 444 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 PTP4A1P6-201ENST00000531034 478 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AC068587.4-201ENST00000533893 186 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.97□□□□□ -1.61
HPS3Q969F9 ATP5J2P6-201ENST00000565203 266 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.97□□□□□ -1.61
HPS3Q969F9 BPIFA4P-203ENST00000603168 689 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AC000123.2-201ENST00000623124 461 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 AL049536.1-201ENST00000625043 744 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
HPS3Q969F9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HPS3Q969F9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 AL356473.1-201ENST00000406203 1408 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HPS3Q969F9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HPS3Q969F9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
HPS3Q969F9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HPS3Q969F9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HPS3Q969F9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC079741.1-201ENST00000321498 212 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 U3.4-201ENST00000363352 213 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 ENSAP1-201ENST00000392855 326 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC004987.3-201ENST00000413879 771 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 RPS12P5-201ENST00000423449 371 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AL512649.1-201ENST00000428997 581 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.96□□□□□ -1.62
HPS3Q969F9 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC012671.1-201ENST00000451912 203 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 RPS27AP17-201ENST00000463344 455 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 PLGLA-201ENST00000465668 449 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 RPL21P126-201ENST00000470049 478 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC093767.1-201ENST00000504523 156 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC010424.1-201ENST00000506336 297 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC093809.1-201ENST00000509155 340 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 RN7SKP277-201ENST00000516895 283 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.96□□□□□ -1.62
HPS3Q969F9 RPL21P7-201ENST00000557463 483 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HPS3Q969F9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.96□□□□□ -1.62
HPS3Q969F9 AC067852.4-201ENST00000590314 478 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 RPL23AP92-201ENST00000603609 255 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AL009028.1-201ENST00000604895 802 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AC128687.1-201ENST00000605304 619 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AL391497.1-201ENST00000608671 547 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AC025588.4-201ENST00000615802 908 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.96□□□□□ -1.62
HPS3Q969F9 MIR6891-201ENST00000618788 93 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 MIR4496-201ENST00000635896 61 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms