RNA–Protein interactions for RNA: ENST00000553211.1

LINC02461-201, Transcript of long intergenic non-protein coding RNA 2461, humanhuman

TSL 3 BASIC

Gene LINC02461, Length 836 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02461-201ENST00000553211 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
LINC02461-201ENST00000553211 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
LINC02461-201ENST00000553211 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
LINC02461-201ENST00000553211 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
LINC02461-201ENST00000553211 FOXD1Q16676 465 aa20.66■□□□□ 0.9
LINC02461-201ENST00000553211 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
LINC02461-201ENST00000553211 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
LINC02461-201ENST00000553211 ADRA2BP18089 450 aa19.58■□□□□ 0.72
LINC02461-201ENST00000553211 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
LINC02461-201ENST00000553211 MSH5O43196 834 aa19.16■□□□□ 0.66
LINC02461-201ENST00000553211 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
LINC02461-201ENST00000553211 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
LINC02461-201ENST00000553211 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
LINC02461-201ENST00000553211 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
LINC02461-201ENST00000553211 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
LINC02461-201ENST00000553211 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
LINC02461-201ENST00000553211 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
LINC02461-201ENST00000553211 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
LINC02461-201ENST00000553211 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
LINC02461-201ENST00000553211 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
LINC02461-201ENST00000553211 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
LINC02461-201ENST00000553211 KCNA4P22459 653 aa16.94■□□□□ 0.3
LINC02461-201ENST00000553211 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
LINC02461-201ENST00000553211 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
LINC02461-201ENST00000553211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC02461-201ENST00000553211 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
LINC02461-201ENST00000553211 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
LINC02461-201ENST00000553211 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
LINC02461-201ENST00000553211 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
LINC02461-201ENST00000553211 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
LINC02461-201ENST00000553211 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
LINC02461-201ENST00000553211 CAPN15O75808 1086 aa15.68■□□□□ 0.1
LINC02461-201ENST00000553211 FOXD4L1Q9NU39 408 aa15.67■□□□□ 0.1
LINC02461-201ENST00000553211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
LINC02461-201ENST00000553211 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
LINC02461-201ENST00000553211 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
LINC02461-201ENST00000553211 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
LINC02461-201ENST00000553211 ZBTB22O15209 634 aa15.58■□□□□ 0.08
LINC02461-201ENST00000553211 APLP2Q06481 763 aa15.57■□□□□ 0.08
LINC02461-201ENST00000553211 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
LINC02461-201ENST00000553211 DSG3P32926 999 aa15.49■□□□□ 0.07
LINC02461-201ENST00000553211 ZNF219Q9P2Y4 722 aaPredicted RBP15.44■□□□□ 0.06
LINC02461-201ENST00000553211 ABCB7O75027 752 aa15.36■□□□□ 0.05
LINC02461-201ENST00000553211 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
LINC02461-201ENST00000553211 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
LINC02461-201ENST00000553211 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
LINC02461-201ENST00000553211 POLA2Q14181 598 aa15.17■□□□□ 0.02
LINC02461-201ENST00000553211 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
LINC02461-201ENST00000553211 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
LINC02461-201ENST00000553211 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
LINC02461-201ENST00000553211 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
LINC02461-201ENST00000553211 FBLN2P98095 1184 aa14.64□□□□□ -0.07
LINC02461-201ENST00000553211 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
LINC02461-201ENST00000553211 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
LINC02461-201ENST00000553211 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
LINC02461-201ENST00000553211 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
LINC02461-201ENST00000553211 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
LINC02461-201ENST00000553211 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
LINC02461-201ENST00000553211 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
LINC02461-201ENST00000553211 POTEHQ6S545 545 aa14.3□□□□□ -0.12
LINC02461-201ENST00000553211 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
LINC02461-201ENST00000553211 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
LINC02461-201ENST00000553211 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
LINC02461-201ENST00000553211 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC02461-201ENST00000553211 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
LINC02461-201ENST00000553211 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
LINC02461-201ENST00000553211 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
LINC02461-201ENST00000553211 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
LINC02461-201ENST00000553211 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC02461-201ENST00000553211 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
LINC02461-201ENST00000553211 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
LINC02461-201ENST00000553211 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
LINC02461-201ENST00000553211 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
LINC02461-201ENST00000553211 FKBP8Q14318 412 aa13.75□□□□□ -0.21
LINC02461-201ENST00000553211 PROM2Q8N271 834 aa13.75□□□□□ -0.21
LINC02461-201ENST00000553211 HAX1O00165 279 aa13.72□□□□□ -0.21
LINC02461-201ENST00000553211 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
LINC02461-201ENST00000553211 EVX2Q03828 476 aa13.6□□□□□ -0.23
LINC02461-201ENST00000553211 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
LINC02461-201ENST00000553211 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
LINC02461-201ENST00000553211 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
LINC02461-201ENST00000553211 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
LINC02461-201ENST00000553211 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
LINC02461-201ENST00000553211 MIER1Q8N108 512 aa13.42□□□□□ -0.26
LINC02461-201ENST00000553211 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC02461-201ENST00000553211 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
LINC02461-201ENST00000553211 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
LINC02461-201ENST00000553211 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
LINC02461-201ENST00000553211 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
LINC02461-201ENST00000553211 GABBR2O75899 941 aa13.29□□□□□ -0.28
LINC02461-201ENST00000553211 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
LINC02461-201ENST00000553211 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
LINC02461-201ENST00000553211 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
LINC02461-201ENST00000553211 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
LINC02461-201ENST00000553211 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
LINC02461-201ENST00000553211 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
LINC02461-201ENST00000553211 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
LINC02461-201ENST00000553211 CLCN6P51797 869 aa13.12□□□□□ -0.31
LINC02461-201ENST00000553211 NUBP1P53384 320 aa13.1□□□□□ -0.31
LINC02461-201ENST00000553211 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms