Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PCDH1Q08174 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH1Q08174 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AL137141.1-201ENST00000624622 4836 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC239868.2-201ENST00000564237 4527 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC010266.2-201ENST00000564741 3255 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC007823.1-201ENST00000569932 1566 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC011155.1-201ENST00000316512 456 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDH1Q08174 Y_RNA.187-201ENST00000363918 113 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 RNA5SP500-201ENST00000364486 119 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH1Q08174 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDH1Q08174 SSXP10-201ENST00000402595 565 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 AL592114.1-201ENST00000403842 483 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 MIR548K-201ENST00000408406 116 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 AL354890.1-201ENST00000413730 346 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH1Q08174 RNF10P1-201ENST00000418589 369 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 PMCHL1-202ENST00000423102 261 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDH1Q08174 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC108059.2-201ENST00000434626 151 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 PRPF38AP2-201ENST00000438179 851 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 HMGB3P11-201ENST00000440127 604 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 AL354710.1-201ENST00000453641 246 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 RNU7-180P-201ENST00000459240 63 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH1Q08174 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH1Q08174 RN7SKP99-201ENST00000517028 307 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 Y_RNA.720-201ENST00000517166 92 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 AC022634.1-201ENST00000520765 532 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH1Q08174 PCNAP4-201ENST00000532690 730 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH1Q08174 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDH1Q08174 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AL031666.3-201ENST00000609320 1006 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 AC007546.1-201ENST00000619452 559 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH1Q08174 AC244517.12-201ENST00000623581 663 ntBASIC5.6□□□□□ -1.51
PCDH1Q08174 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDH1Q08174 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDH1Q08174 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCDH1Q08174 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH1Q08174 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH1Q08174 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PCDH1Q08174 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 TAB3P1-202ENST00000452645 1634 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PCDH1Q08174 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
PCDH1Q08174 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PCDH1Q08174 RNA5SP273-201ENST00000362484 113 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 RNU6-1309P-201ENST00000363305 108 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH1Q08174 RNU6-641P-201ENST00000384006 107 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 RNU6-1029P-201ENST00000384109 107 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 RNU6-308P-201ENST00000390957 107 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC004386.1-201ENST00000393214 761 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 RNU6-1304P-201ENST00000411374 106 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC074085.1-201ENST00000413598 418 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC110602.1-201ENST00000437414 318 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 FHP1-201ENST00000442741 703 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH1Q08174 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH1Q08174 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AC016724.1-201ENST00000453215 421 ntBASIC5.59□□□□□ -1.51
PCDH1Q08174 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms