Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL035407.2-201ENST00000454090 378 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 snoU13.3-201ENST00000459441 104 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL5P24-201ENST00000463742 885 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC025181.1-201ENST00000477507 416 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL12P22-201ENST00000519073 490 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 CR383656.14-201ENST00000551951 406 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC008507.1-201ENST00000587506 734 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC099676.1-201ENST00000608886 657 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AC107294.3-201ENST00000609211 526 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 AP000553.6-201ENST00000641242 118 ntBASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNB1IP1Q9NPC3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC007823.1-201ENST00000569932 1566 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 MTND4P34-201ENST00000572715 1371 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-1005P-201ENST00000384519 107 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-1151P-201ENST00000384684 107 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 SFR1P1-201ENST00000403720 688 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-272P-201ENST00000411028 104 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU2-71P-201ENST00000411395 189 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 BX890604.2-201ENST00000427883 474 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AL590103.1-201ENST00000434488 307 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RAB11AP1-201ENST00000442978 646 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AL357552.1-201ENST00000445254 415 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC010655.1-201ENST00000449336 292 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RPS27P23-201ENST00000487608 251 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RNF138P1-201ENST00000502765 546 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC133963.2-201ENST00000513686 578 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 MTND4LP31-201ENST00000514859 294 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 OR7E13P-201ENST00000526052 910 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 MIR3160-1-201ENST00000577972 85 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 RN7SL703P-201ENST00000578485 302 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AL009028.1-201ENST00000604895 802 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC100814.1-201ENST00000606963 623 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AC024941.1-201ENST00000612250 334 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 AL672296.1-201ENST00000427780 2158 ntBASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNB1IP1Q9NPC3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-629P-201ENST00000384061 103 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AL356057.1-202ENST00000402263 756 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RN7SKP156-201ENST00000410308 342 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AL158825.1-201ENST00000414735 521 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RPS3AP9-201ENST00000417027 792 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 OFD1P18Y-201ENST00000420889 959 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms