Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.22□□□□□ -1.41
SNIP1Q8TAD8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 TATDN2P3-201ENST00000452855 3665 ntBASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SNIP1Q8TAD8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 MIR323A-201ENST00000362199 86 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 RNU6-858P-201ENST00000362436 107 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 RNU6-214P-201ENST00000384130 107 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 HMGN1P24-201ENST00000412282 298 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 SNX18P24-201ENST00000505249 671 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 RNA5SP418-201ENST00000515951 117 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 RNU6-313P-201ENST00000516317 112 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 RN7SKP35-201ENST00000517210 151 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 MTND5P41-201ENST00000517498 206 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 SOD1P3-201ENST00000518682 454 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AC100784.1-201ENST00000522790 310 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AC012339.2-201ENST00000523996 453 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 HMGB1P42-201ENST00000532126 553 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 LSM6P2-201ENST00000552208 177 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AL121576.1-201ENST00000556055 276 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 MIR4701-201ENST00000583094 63 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 U1.41-201ENST00000617626 165 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AL136313.1-201ENST00000624804 202 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AC011369.2-201ENST00000624423 1567 ntBASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.21□□□□□ -1.42
SNIP1Q8TAD8 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AC007114.2-201ENST00000576014 4281 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AL133243.4-201ENST00000623116 3109 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 Y_RNA.304-201ENST00000365011 112 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 RN7SKP62-201ENST00000384539 329 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 MIR517A-201ENST00000385001 87 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 RNU6-1154P-201ENST00000391001 104 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 RNA5SP178-201ENST00000410380 128 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 OR4C10P-201ENST00000434991 931 ntBASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.2□□□□□ -1.42
SNIP1Q8TAD8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms