Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MAPK10-304ENST00000641341 3984 ntBASIC4.32□□□□□ -1.72
RAE1P78406 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 AC130650.2-201ENST00000618736 2403 ntBASIC4.32□□□□□ -1.72
RAE1P78406 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 OR14L1P-202ENST00000641545 3009 ntBASIC4.32□□□□□ -1.72
RAE1P78406 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RAE1P78406 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 LINC00622-201ENST00000562811 1570 ntBASIC4.31□□□□□ -1.72
RAE1P78406 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RAE1P78406 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 TEX21P-201ENST00000447107 1476 ntBASIC4.31□□□□□ -1.72
RAE1P78406 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 NXPH1-205ENST00000602349 1953 ntBASIC4.31□□□□□ -1.72
RAE1P78406 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 GDI2P1-201ENST00000429312 1336 ntBASIC4.31□□□□□ -1.72
RAE1P78406 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RAE1P78406 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 Y_RNA.3-201ENST00000362331 103 ntBASIC4.31□□□□□ -1.72
RAE1P78406 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 RNA5SP372-201ENST00000390836 115 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC016769.3-201ENST00000396562 315 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AL049697.2-201ENST00000403708 294 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 TPMTP2-201ENST00000414372 726 ntBASIC4.31□□□□□ -1.72
RAE1P78406 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.31□□□□□ -1.72
RAE1P78406 RPS27AP7-201ENST00000422792 455 ntBASIC4.31□□□□□ -1.72
RAE1P78406 RPL37P21-201ENST00000435890 276 ntBASIC4.31□□□□□ -1.72
RAE1P78406 RPL12P46-201ENST00000436610 195 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 GEMIN8P3-201ENST00000445417 720 ntBASIC4.31□□□□□ -1.72
RAE1P78406 PTMAP3-201ENST00000447474 330 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.31□□□□□ -1.72
RAE1P78406 RPL23AP65-201ENST00000475608 468 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC017015.1-201ENST00000477387 286 ntBASIC4.31□□□□□ -1.72
RAE1P78406 FAM172BP-201ENST00000487497 1089 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC108022.1-201ENST00000493466 478 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC090453.1-201ENST00000495560 436 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 AC024589.1-201ENST00000512207 263 ntBASIC4.31□□□□□ -1.72
RAE1P78406 DUXAP2-201ENST00000519198 589 ntBASIC4.31□□□□□ -1.72
RAE1P78406 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
RAE1P78406 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.31□□□□□ -1.72
RAE1P78406 AC090151.1-201ENST00000520784 730 ntBASIC4.31□□□□□ -1.72
RAE1P78406 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.31□□□□□ -1.72
RAE1P78406 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC013828.2-201ENST00000532487 235 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.31□□□□□ -1.72
RAE1P78406 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.31□□□□□ -1.72
RAE1P78406 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RAE1P78406 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 AL390726.5-202ENST00000564800 256 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.31□□□□□ -1.72
RAE1P78406 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 AP003465.2-201ENST00000602571 373 ntBASIC4.31□□□□□ -1.72
RAE1P78406 BPIFA4P-203ENST00000603168 689 ntBASIC4.31□□□□□ -1.72
RAE1P78406 PRELID3BP8-201ENST00000604148 295 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC090186.1-201ENST00000605991 572 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC097468.3-201ENST00000607956 456 ntBASIC4.31□□□□□ -1.72
RAE1P78406 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.31□□□□□ -1.72
RAE1P78406 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.31□□□□□ -1.72
RAE1P78406 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 AL357080.1-201ENST00000617394 239 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RAE1P78406 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.31□□□□□ -1.72
RAE1P78406 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 AL592148.3-201ENST00000608771 2646 ntBASIC4.31□□□□□ -1.72
RAE1P78406 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RAE1P78406 AC108467.2-201ENST00000617640 1597 ntBASIC4.31□□□□□ -1.72
RAE1P78406 AC006378.2-201ENST00000623178 2476 ntBASIC4.31□□□□□ -1.72
RAE1P78406 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAE1P78406 AC139769.1-204ENST00000472297 1931 ntBASIC4.31□□□□□ -1.72
RAE1P78406 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAE1P78406 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAE1P78406 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.3□□□□□ -1.72
RAE1P78406 AC090971.4-201ENST00000560291 1800 ntBASIC4.3□□□□□ -1.72
RAE1P78406 OR51H2P-202ENST00000641424 3046 ntBASIC4.3□□□□□ -1.72
RAE1P78406 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
RAE1P78406 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.3□□□□□ -1.72
RAE1P78406 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms