Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RPL7P39-201ENST00000481157 744 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 PHBP17-201ENST00000528576 541 ntBASIC5.47□□□□□ -1.53
CCNFP41002 BRD9P1-201ENST00000529855 560 ntBASIC5.47□□□□□ -1.53
CCNFP41002 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 AC243972.3-201ENST00000539655 198 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 AL049872.1-201ENST00000556323 322 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.47□□□□□ -1.53
CCNFP41002 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNFP41002 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 AL355472.4-201ENST00000610233 626 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 AC127024.6-201ENST00000621598 424 ntBASIC5.47□□□□□ -1.53
CCNFP41002 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNFP41002 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNFP41002 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNFP41002 AC073869.8-201ENST00000641806 335 ntBASIC5.47□□□□□ -1.53
CCNFP41002 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNFP41002 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNFP41002 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCNFP41002 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCNFP41002 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CCNFP41002 AC130650.2-201ENST00000618736 2403 ntBASIC5.46□□□□□ -1.53
CCNFP41002 SRRM1P3-201ENST00000426911 2678 ntBASIC5.46□□□□□ -1.54
CCNFP41002 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 ELL2P4-201ENST00000446870 1376 ntBASIC5.46□□□□□ -1.54
CCNFP41002 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNFP41002 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCNFP41002 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 RNU6-1120P-201ENST00000362988 108 ntBASIC5.46□□□□□ -1.54
CCNFP41002 RNU6-1243P-201ENST00000364028 107 ntBASIC5.46□□□□□ -1.54
CCNFP41002 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 MIR551A-201ENST00000385042 96 ntBASIC5.46□□□□□ -1.54
CCNFP41002 SSXP10-201ENST00000402595 565 ntBASIC5.46□□□□□ -1.54
CCNFP41002 FAT1P1-201ENST00000406588 507 ntBASIC5.46□□□□□ -1.54
CCNFP41002 RNU6-1068P-201ENST00000410958 103 ntBASIC5.46□□□□□ -1.54
CCNFP41002 CTSL3P-202ENST00000412179 788 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.46□□□□□ -1.54
CCNFP41002 RPL12P9-201ENST00000412942 488 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 EIF1P3-201ENST00000423841 334 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.46□□□□□ -1.54
CCNFP41002 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNFP41002 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AC064862.4-201ENST00000442180 334 ntBASIC5.46□□□□□ -1.54
CCNFP41002 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.46□□□□□ -1.54
CCNFP41002 RPL7P52-201ENST00000449200 742 ntBASIC5.46□□□□□ -1.54
CCNFP41002 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AL035090.1-201ENST00000454835 332 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 RPS3AP50-201ENST00000487064 803 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AL049874.2-201ENST00000492636 288 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.46□□□□□ -1.54
CCNFP41002 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AC112191.2-201ENST00000522428 333 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.46□□□□□ -1.54
CCNFP41002 AC022616.3-201ENST00000523940 148 ntBASIC5.46□□□□□ -1.54
CCNFP41002 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AL109766.1-201ENST00000555080 552 ntBASIC5.46□□□□□ -1.54
CCNFP41002 RN7SL802P-201ENST00000577858 299 ntBASIC5.46□□□□□ -1.54
CCNFP41002 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.46□□□□□ -1.54
CCNFP41002 AP000769.2-201ENST00000602344 396 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AP001429.1-201ENST00000602568 530 ntBASIC5.46□□□□□ -1.54
CCNFP41002 RPL26P30-202ENST00000602923 645 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AC115621.1-201ENST00000604653 858 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 AC009233.1-201ENST00000616477 371 ntBASIC5.46□□□□□ -1.54
CCNFP41002 AL138820.1-201ENST00000617901 5305 ntBASIC5.46□□□□□ -1.54
CCNFP41002 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCNFP41002 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCNFP41002 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNFP41002 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCNFP41002 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.45□□□□□ -1.54
CCNFP41002 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
CCNFP41002 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 NACAP2-201ENST00000318548 624 ntBASIC5.45□□□□□ -1.54
CCNFP41002 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCNFP41002 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCNFP41002 RNU6-845P-201ENST00000362578 103 ntBASIC5.45□□□□□ -1.54
CCNFP41002 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 AL031985.1-201ENST00000392713 418 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms