Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 MIR4646-201ENST00000580775 63 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 MIR548AB-201ENST00000584917 84 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 OR7E18P-201ENST00000592589 702 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 AC027807.2-201ENST00000616099 408 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 AL357080.1-201ENST00000617394 239 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 AC140113.4-201ENST00000622087 222 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 LINC01109-201ENST00000603837 3081 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 AL672167.1-205ENST00000641112 3080 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.67□□□□□ -1.66
TRIM54Q9BYV2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 Y_RNA.97-201ENST00000363094 102 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 ENSAP1-201ENST00000392855 326 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 DEFB108C-201ENST00000400154 252 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AL080315.1-201ENST00000406055 466 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 RN7SKP56-201ENST00000410513 331 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 RPL21P108-201ENST00000413857 481 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC004987.3-201ENST00000413879 771 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 RPL21P32-201ENST00000419877 477 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 MTCO2P5-201ENST00000422621 426 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 MTND1P28-201ENST00000435623 950 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC104651.2-201ENST00000447549 528 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 HIGD1AP8-201ENST00000453927 274 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 BX322784.1-201ENST00000455793 1077 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 RPL31P50-201ENST00000471002 296 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 PRELID3BP7-201ENST00000503606 469 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 ARL2BPP4-201ENST00000506854 471 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 RN7SKP277-201ENST00000516895 283 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 RNA5SP392-201ENST00000516905 112 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 COX6CP8-201ENST00000522620 226 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AP000676.2-201ENST00000529711 301 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 OR5AP1P-201ENST00000529730 940 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 PTP4A1P6-201ENST00000531034 478 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AP002453.2-201ENST00000533503 320 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 CR383656.6-201ENST00000550518 394 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC093249.4-201ENST00000564755 259 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 MIR5699-201ENST00000578903 90 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 MIR544B-201ENST00000582372 78 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC087683.1-201ENST00000591187 441 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 MIR6798-201ENST00000612887 67 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 DCAF13P1-201ENST00000495256 1330 ntBASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRIM54Q9BYV2 MTND4P26-201ENST00000415971 1359 ntBASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.65□□□□□ -1.66
TRIM54Q9BYV2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM54Q9BYV2 RNU5E-5P-201ENST00000365379 116 ntBASIC4.65□□□□□ -1.67
TRIM54Q9BYV2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM54Q9BYV2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM54Q9BYV2 COX6B1P1-201ENST00000415962 213 ntBASIC4.65□□□□□ -1.67
TRIM54Q9BYV2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM54Q9BYV2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM54Q9BYV2 COX6CP17-201ENST00000421389 185 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms