Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CFAP43Q8NDM7 MIR9-1-201ENST00000385198 89 ntBASIC4.6□□□□□ -1.67
CFAP43Q8NDM7 AL445528.1-201ENST00000426330 420 ntBASIC4.6□□□□□ -1.67
CFAP43Q8NDM7 AC104058.1-201ENST00000448028 297 ntBASIC4.6□□□□□ -1.67
CFAP43Q8NDM7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.6□□□□□ -1.67
CFAP43Q8NDM7 RN7SKP272-201ENST00000516988 232 ntBASIC4.6□□□□□ -1.67
CFAP43Q8NDM7 MAPK10-373ENST00000641983 6772 ntBASIC4.6□□□□□ -1.67
CFAP43Q8NDM7 AC046144.1-201ENST00000478559 1853 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 U3.11-201ENST00000364476 212 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 AL513328.1-201ENST00000446460 224 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 FAM172BP-201ENST00000487497 1089 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 RN7SL371P-201ENST00000578099 267 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 MIR5047-201ENST00000579212 100 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 AL035413.2-201ENST00000604801 525 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 AC026790.2-201ENST00000606282 430 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 AL356490.1-201ENST00000623079 479 ntBASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CFAP43Q8NDM7 RNU2-52P-201ENST00000410680 190 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 AC006960.1-201ENST00000419980 153 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 AL591623.2-201ENST00000449978 222 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 FGF7P3-201ENST00000454645 303 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 AP002812.4-201ENST00000532139 286 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 AC098826.3-201ENST00000603823 466 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 AL451049.1-201ENST00000608672 497 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 MTND4P10-201ENST00000446199 1363 ntBASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CFAP43Q8NDM7 FAM133CP-201ENST00000332869 704 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 RAC1P3-201ENST00000416129 580 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 AC025946.2-201ENST00000603398 234 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 AC064859.1-201ENST00000624741 174 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 AC017002.4-201ENST00000604721 1525 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 RN7SKP58-201ENST00000411010 305 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 RPS6P2-201ENST00000454208 705 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 MIR7111-201ENST00000619751 72 ntBASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.57□□□□□ -1.68
CFAP43Q8NDM7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 AC110754.1-201ENST00000399740 601 ntBASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 RN7SKP285-201ENST00000410137 318 ntBASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 MRPL50P2-201ENST00000416821 482 ntBASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 RPL31P13-201ENST00000484151 370 ntBASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 AC007318.2-201ENST00000620999 243 ntBASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CFAP43Q8NDM7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 AL583834.1-201ENST00000406943 343 ntBASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 AC005189.1-201ENST00000431286 310 ntBASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 RNA5SP24-201ENST00000516478 95 ntBASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CFAP43Q8NDM7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 PPIAP17-201ENST00000438507 471 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 SNORA64.4-201ENST00000516632 81 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC090312.2-201ENST00000582687 378 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC018690.1-201ENST00000608144 626 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AMD1P2-201ENST00000412936 992 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 snoU13.23-201ENST00000458863 104 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC090281.1-201ENST00000523019 276 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC096947.1-201ENST00000603233 470 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 AC007566.2-201ENST00000603642 413 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 PLCE1P1-201ENST00000622094 305 ntBASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.54□□□□□ -1.68
CFAP43Q8NDM7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms