Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RPS29P5-201ENST00000452777 171 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 RNU6-893P-201ENST00000458841 100 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AC117395.2-201ENST00000463122 1128 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AC063943.2-201ENST00000495697 534 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 AP004609.2-201ENST00000532177 190 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AC233290.2-201ENST00000552852 390 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 AC142086.3-201ENST00000563896 802 ntBASIC8.26□□□□□ -1.09
HOXD11P31277 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.26□□□□□ -1.09
HOXD11P31277 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.26□□□□□ -1.09
HOXD11P31277 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
HOXD11P31277 KCNMA1-228ENST00000638223 4340 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.26□□□□□ -1.09
HOXD11P31277 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.26□□□□□ -1.09
HOXD11P31277 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.26□□□□□ -1.09
HOXD11P31277 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
HOXD11P31277 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
HOXD11P31277 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 AC120036.5-201ENST00000528139 2491 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXD11P31277 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
HOXD11P31277 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXD11P31277 MIR302B-201ENST00000362188 73 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 Y_RNA.78-201ENST00000362970 110 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 Y_RNA.93-201ENST00000363066 109 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 RPSAP72-201ENST00000407020 358 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXD11P31277 ATP6V0E1P4-201ENST00000427294 242 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC8.25□□□□□ -1.09
HOXD11P31277 AC141557.1-201ENST00000540982 400 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 MIR5192-201ENST00000579892 92 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 MIR6745-201ENST00000612694 127 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
HOXD11P31277 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
HOXD11P31277 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
HOXD11P31277 C3P1-202ENST00000497718 4954 ntBASIC8.25□□□□□ -1.09
HOXD11P31277 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXD11P31277 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC8.25□□□□□ -1.09
HOXD11P31277 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.25□□□□□ -1.09
HOXD11P31277 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.25□□□□□ -1.09
HOXD11P31277 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HOXD11P31277 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXD11P31277 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXD11P31277 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXD11P31277 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXD11P31277 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXD11P31277 RNU6-1249P-201ENST00000363237 111 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 SNORA18.3-201ENST00000384122 132 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 AC009362.1-201ENST00000427253 406 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.24□□□□□ -1.09
HOXD11P31277 GCNT1P5-201ENST00000449274 682 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXD11P31277 AP000705.1-201ENST00000454567 350 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 AC098818.1-201ENST00000478593 252 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 RNU2-13P-201ENST00000515909 113 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.24□□□□□ -1.09
HOXD11P31277 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXD11P31277 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 MIR3663-201ENST00000583207 97 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXD11P31277 ABBA01040607.1-201ENST00000640749 321 ntBASIC8.24□□□□□ -1.09
HOXD11P31277 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms