Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 U3.11-201ENST00000364476 212 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 RNU6-609P-201ENST00000365459 107 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 RNU6-356P-201ENST00000384140 107 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 MIR30B-201ENST00000384850 88 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFX4Q33E94 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.28□□□□□ -1.88
RFX4Q33E94 RNU6-628P-201ENST00000410675 107 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC073310.1-201ENST00000423226 1033 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 ETF1P3-201ENST00000430422 1160 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX4Q33E94 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX4Q33E94 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 RPL37P3-201ENST00000456825 293 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 OR5H3P-201ENST00000502817 919 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX4Q33E94 AC008565.1-201ENST00000509046 885 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 MIR2276-201ENST00000516886 89 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX4Q33E94 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX4Q33E94 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX4Q33E94 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX4Q33E94 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX4Q33E94 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX4Q33E94 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFX4Q33E94 AC009948.4-201ENST00000604692 675 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC005972.3-201ENST00000606304 481 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 RNU1-30P-201ENST00000606575 163 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC011816.2-201ENST00000607089 556 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFX4Q33E94 AC005344.1-201ENST00000613391 459 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFX4Q33E94 AP003355.3-201ENST00000623465 114 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 AC016717.3-201ENST00000624730 554 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 RNA5SP196-201ENST00000625967 102 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX4Q33E94 AC073476.4-201ENST00000628409 72 ntBASIC3.28□□□□□ -1.88
RFX4Q33E94 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX4Q33E94 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFX4Q33E94 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RFX4Q33E94 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
RFX4Q33E94 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
RFX4Q33E94 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFX4Q33E94 FAM91A3P-201ENST00000456826 2544 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC092326.2-201ENST00000624772 1561 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RFX4Q33E94 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RFX4Q33E94 RNA5SP189-201ENST00000364920 115 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 HMGB3P23-201ENST00000414981 585 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX4Q33E94 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX4Q33E94 ISCA1P2-201ENST00000438679 421 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 RPS26P30-201ENST00000443431 335 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RFX4Q33E94 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX4Q33E94 AC239367.2-201ENST00000447309 705 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 RPL7P55-201ENST00000450522 746 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX4Q33E94 AC146507.1-201ENST00000468335 354 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC121161.1-201ENST00000510606 652 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX4Q33E94 AC092593.2-201ENST00000513866 913 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 RNU6-467P-201ENST00000517027 110 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 SOD1P3-201ENST00000518682 454 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC008562.1-201ENST00000521763 330 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 OR4R2P-201ENST00000530815 597 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX4Q33E94 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX4Q33E94 AC136624.4-201ENST00000573044 370 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 MIR5187-201ENST00000583479 76 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 RN7SL622P-201ENST00000585292 275 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC010928.3-201ENST00000587712 541 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC125494.3-201ENST00000602759 455 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 NTAN1P1-201ENST00000603150 646 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC245100.7-201ENST00000609678 442 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 MIR6875-201ENST00000617506 72 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 STMN1P1-201ENST00000617809 440 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFX4Q33E94 AC243756.2-201ENST00000618406 463 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC073569.3-201ENST00000619055 682 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFX4Q33E94 AL354798.1-201ENST00000622505 329 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AC048347.1-201ENST00000624621 427 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFX4Q33E94 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX4Q33E94 AP004289.2-201ENST00000444413 1457 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 AL157700.1-201ENST00000561973 1432 ntBASIC3.27□□□□□ -1.89
RFX4Q33E94 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX4Q33E94 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC138915.3-201ENST00000562908 1389 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC017071.1-201ENST00000564407 2204 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 PPIAP31-201ENST00000405422 495 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms