Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 Y_RNA.687-201ENST00000516558 91 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 RNU6-919P-201ENST00000516731 104 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 CYCSP22-201ENST00000517555 339 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.17□□□□□ -1.42
FOXC1Q12948 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 AC063949.1-201ENST00000552900 865 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AC022404.1-201ENST00000555320 273 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AL133153.1-201ENST00000557756 303 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 AL138889.2-201ENST00000603883 242 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 SUMO2P15-201ENST00000604285 278 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AC108706.1-201ENST00000611053 297 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AP005431.1-201ENST00000618479 319 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXC1Q12948 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
FOXC1Q12948 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXC1Q12948 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 BX322639.1-202ENST00000423987 2213 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
FOXC1Q12948 AC139426.3-201ENST00000605648 2059 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXC1Q12948 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXC1Q12948 HSPA8P14-201ENST00000552265 1805 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 HSP90AB7P-201ENST00000450068 2454 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AC022034.1-201ENST00000512867 2156 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 RNU6-715P-201ENST00000365204 103 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 U3.43-201ENST00000410734 213 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 RN7SKP293-201ENST00000411389 296 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 RPL19P1-201ENST00000411635 428 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AC017079.2-201ENST00000416102 485 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXC1Q12948 RPS12P5-201ENST00000423449 371 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 ANKRD54P1-201ENST00000433115 471 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AP000281.1-201ENST00000444036 316 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXC1Q12948 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXC1Q12948 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.16□□□□□ -1.42
FOXC1Q12948 LSM6P2-201ENST00000552208 177 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXC1Q12948 MIR4293-201ENST00000584305 78 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.16□□□□□ -1.42
FOXC1Q12948 AL513218.1-201ENST00000606527 391 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 AL161616.1-201ENST00000611867 286 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXC1Q12948 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXC1Q12948 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXC1Q12948 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 SAGE3P-201ENST00000619800 1635 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXC1Q12948 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXC1Q12948 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
FOXC1Q12948 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 AC016583.1-201ENST00000624221 2431 ntBASIC6.16□□□□□ -1.42
FOXC1Q12948 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
FOXC1Q12948 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXC1Q12948 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXC1Q12948 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXC1Q12948 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXC1Q12948 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXC1Q12948 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXC1Q12948 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXC1Q12948 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXC1Q12948 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXC1Q12948 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXC1Q12948 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
FOXC1Q12948 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXC1Q12948 RNA5SP205-201ENST00000364653 136 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXC1Q12948 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
FOXC1Q12948 Y_RNA.581-201ENST00000391017 97 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 RN7SKP281-201ENST00000410472 352 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 SDHDP6-201ENST00000414693 480 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 GAPDHP58-201ENST00000438477 1006 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 TPT1P12-201ENST00000448968 492 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 SNORD97-201ENST00000459187 142 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms