Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
BIVM-ERCC5R4GMW8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
BIVM-ERCC5R4GMW8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC32.18■■■□□ 2.74
BIVM-ERCC5R4GMW8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
BIVM-ERCC5R4GMW8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC32.18■■■□□ 2.74
BIVM-ERCC5R4GMW8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
BIVM-ERCC5R4GMW8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 GAS2L1P1-201ENST00000420145 1480 ntBASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 SEC1P-202ENST00000473944 940 ntBASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
BIVM-ERCC5R4GMW8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 MIR3180-1-201ENST00000580374 94 ntBASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 MIR3180-3-201ENST00000584616 94 ntBASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 AC093525.10-201ENST00000625130 1569 ntBASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
BIVM-ERCC5R4GMW8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 AC099778.1-201ENST00000568593 1911 ntBASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC32.14■■■□□ 2.74
BIVM-ERCC5R4GMW8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 AC092597.1-201ENST00000487352 616 ntBASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC32.13■■■□□ 2.73
BIVM-ERCC5R4GMW8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
BIVM-ERCC5R4GMW8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
BIVM-ERCC5R4GMW8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
BIVM-ERCC5R4GMW8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC32.12■■■□□ 2.73
BIVM-ERCC5R4GMW8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
BIVM-ERCC5R4GMW8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 TPM4P1-201ENST00000436100 807 ntBASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
BIVM-ERCC5R4GMW8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 AC007375.3-201ENST00000600936 2314 ntBASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
BIVM-ERCC5R4GMW8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms