Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 CHCHD2P8-201ENST00000429873 447 ntBASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 AL121772.3-201ENST00000610840 674 ntBASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 AC026310.3-201ENST00000625186 2373 ntBASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCH2Q9Y6C5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 MRPL3P1-201ENST00000400109 1033 ntBASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 AC120114.3-201ENST00000611923 658 ntBASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCH2Q9Y6C5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PTCH2Q9Y6C5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTCH2Q9Y6C5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.77■■□□□ 1.07
PTCH2Q9Y6C5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 FOSL1P1-201ENST00000511041 816 ntBASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 AP000867.3-201ENST00000524675 377 ntBASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCH2Q9Y6C5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 AL662844.1-201ENST00000546340 181 ntBASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 LINC01711-201ENST00000598340 967 ntBASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCH2Q9Y6C5 AL162741.1-201ENST00000565563 1558 ntBASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.74■■□□□ 1.07
PTCH2Q9Y6C5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms