Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 TCF3P1-201ENST00000423021 1937 ntBASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SCN10AQ9Y5Y9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 AC012313.10-201ENST00000623509 926 ntBASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCN10AQ9Y5Y9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 AL645929.1-201ENST00000420084 975 ntBASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 TSPY21P-201ENST00000433481 731 ntBASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCN10AQ9Y5Y9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 GPAT2P1-201ENST00000444924 1672 ntBASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN10AQ9Y5Y9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.11■□□□□ 0.97
SCN10AQ9Y5Y9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 RASA4DP-201ENST00000460726 1199 ntBASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 MIR3180-1-201ENST00000580374 94 ntBASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 MIR3180-3-201ENST00000584616 94 ntBASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms