Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 FAM8A6P-201ENST00000407496 1135 ntBASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 AC010653.2-201ENST00000623505 997 ntBASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 PHGDH-210ENST00000641115 1638 ntBASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA9Q9Y5G4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 FP700111.2-201ENST00000619190 1892 ntBASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 INGX-201ENST00000359239 846 ntBASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 AC117947.1-201ENST00000427448 529 ntBASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 FAM207BP-201ENST00000447172 505 ntBASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 HLA-A-209ENST00000638375 975 ntBASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA9Q9Y5G4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA9Q9Y5G4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA9Q9Y5G4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA9Q9Y5G4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA9Q9Y5G4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA9Q9Y5G4 AC099778.1-201ENST00000568593 1911 ntBASIC17.98■□□□□ 0.47
PCDHGA9Q9Y5G4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA9Q9Y5G4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms