Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 ANO7L1-203ENST00000602586 1720 ntBASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 RARRES2P4-201ENST00000514074 484 ntBASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 CD276-203ENST00000537340 2439 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP4R2Q9NY27 AC104417.2-201ENST00000562989 1793 ntBASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R2Q9NY27 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R2Q9NY27 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 AC142381.2-201ENST00000566120 298 ntBASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 TFP1-202ENST00000475455 1573 ntBASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC24.66■■□□□ 1.54
PPP4R2Q9NY27 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PPP4R2Q9NY27 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R2Q9NY27 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms