Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC018695.7-201ENST00000624587 2492 ntBASIC17.89■□□□□ 0.45
CHCHD3Q9NX63 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHCHD3Q9NX63 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHCHD3Q9NX63 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHCHD3Q9NX63 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 CICP6-201ENST00000457191 2729 ntBASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHCHD3Q9NX63 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 AC007322.3-201ENST00000426526 701 ntBASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 AC012414.1-201ENST00000556676 535 ntBASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 AC131212.1-201ENST00000613771 668 ntBASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHCHD3Q9NX63 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.86■□□□□ 0.45
CHCHD3Q9NX63 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms